Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8048 | 24367;24368;24369 | chr2:178719248;178719247;178719246 | chr2:179583975;179583974;179583973 |
N2AB | 7731 | 23416;23417;23418 | chr2:178719248;178719247;178719246 | chr2:179583975;179583974;179583973 |
N2A | 6804 | 20635;20636;20637 | chr2:178719248;178719247;178719246 | chr2:179583975;179583974;179583973 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.012 | N | 0.203 | 0.202 | 0.401612077098 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85842E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1213 | likely_benign | 0.1262 | benign | -0.542 | Destabilizing | 0.454 | N | 0.33 | neutral | N | 0.50827853 | None | None | I |
E/C | 0.7177 | likely_pathogenic | 0.7261 | pathogenic | -0.212 | Destabilizing | 0.998 | D | 0.491 | neutral | None | None | None | None | I |
E/D | 0.1021 | likely_benign | 0.099 | benign | -0.535 | Destabilizing | 0.012 | N | 0.146 | neutral | N | 0.451886529 | None | None | I |
E/F | 0.5426 | ambiguous | 0.5629 | ambiguous | -0.076 | Destabilizing | 0.991 | D | 0.435 | neutral | None | None | None | None | I |
E/G | 0.0933 | likely_benign | 0.0963 | benign | -0.826 | Destabilizing | 0.012 | N | 0.203 | neutral | N | 0.483556231 | None | None | I |
E/H | 0.2561 | likely_benign | 0.2795 | benign | 0.004 | Stabilizing | 0.991 | D | 0.371 | neutral | None | None | None | None | I |
E/I | 0.2647 | likely_benign | 0.2815 | benign | 0.205 | Stabilizing | 0.974 | D | 0.445 | neutral | None | None | None | None | I |
E/K | 0.0871 | likely_benign | 0.0996 | benign | 0.1 | Stabilizing | 0.022 | N | 0.111 | neutral | N | 0.463428888 | None | None | I |
E/L | 0.2071 | likely_benign | 0.2203 | benign | 0.205 | Stabilizing | 0.915 | D | 0.405 | neutral | None | None | None | None | I |
E/M | 0.3089 | likely_benign | 0.3181 | benign | 0.372 | Stabilizing | 0.998 | D | 0.411 | neutral | None | None | None | None | I |
E/N | 0.1625 | likely_benign | 0.1662 | benign | -0.452 | Destabilizing | 0.728 | D | 0.269 | neutral | None | None | None | None | I |
E/P | 0.6351 | likely_pathogenic | 0.6589 | pathogenic | -0.022 | Destabilizing | 0.974 | D | 0.375 | neutral | None | None | None | None | I |
E/Q | 0.0828 | likely_benign | 0.09 | benign | -0.337 | Destabilizing | 0.801 | D | 0.382 | neutral | N | 0.431183183 | None | None | I |
E/R | 0.1503 | likely_benign | 0.1669 | benign | 0.384 | Stabilizing | 0.728 | D | 0.333 | neutral | None | None | None | None | I |
E/S | 0.1284 | likely_benign | 0.1316 | benign | -0.636 | Destabilizing | 0.842 | D | 0.248 | neutral | None | None | None | None | I |
E/T | 0.1661 | likely_benign | 0.1764 | benign | -0.39 | Destabilizing | 0.842 | D | 0.363 | neutral | None | None | None | None | I |
E/V | 0.1551 | likely_benign | 0.1616 | benign | -0.022 | Destabilizing | 0.891 | D | 0.385 | neutral | N | 0.501411273 | None | None | I |
E/W | 0.7782 | likely_pathogenic | 0.7921 | pathogenic | 0.18 | Stabilizing | 0.998 | D | 0.564 | neutral | None | None | None | None | I |
E/Y | 0.4106 | ambiguous | 0.4316 | ambiguous | 0.19 | Stabilizing | 0.991 | D | 0.421 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.