Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8049 | 24370;24371;24372 | chr2:178719245;178719244;178719243 | chr2:179583972;179583971;179583970 |
N2AB | 7732 | 23419;23420;23421 | chr2:178719245;178719244;178719243 | chr2:179583972;179583971;179583970 |
N2A | 6805 | 20638;20639;20640 | chr2:178719245;178719244;178719243 | chr2:179583972;179583971;179583970 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.001 | N | 0.214 | 0.184 | 0.278968121808 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
P/S | None | None | None | N | 0.16 | 0.136 | 0.0611884634855 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85838E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0711 | likely_benign | 0.0651 | benign | -0.59 | Destabilizing | 0.019 | N | 0.239 | neutral | N | 0.460440858 | None | None | I |
P/C | 0.3647 | ambiguous | 0.3561 | ambiguous | -0.657 | Destabilizing | 0.883 | D | 0.331 | neutral | None | None | None | None | I |
P/D | 0.1894 | likely_benign | 0.1874 | benign | -0.36 | Destabilizing | 0.22 | N | 0.267 | neutral | None | None | None | None | I |
P/E | 0.1485 | likely_benign | 0.1422 | benign | -0.471 | Destabilizing | 0.124 | N | 0.269 | neutral | None | None | None | None | I |
P/F | 0.2363 | likely_benign | 0.2338 | benign | -0.8 | Destabilizing | 0.497 | N | 0.357 | neutral | None | None | None | None | I |
P/G | 0.1662 | likely_benign | 0.1559 | benign | -0.739 | Destabilizing | 0.055 | N | 0.294 | neutral | None | None | None | None | I |
P/H | 0.1148 | likely_benign | 0.1068 | benign | -0.282 | Destabilizing | 0.602 | D | 0.325 | neutral | N | 0.513717982 | None | None | I |
P/I | 0.1646 | likely_benign | 0.1623 | benign | -0.345 | Destabilizing | 0.124 | N | 0.321 | neutral | None | None | None | None | I |
P/K | 0.1344 | likely_benign | 0.1365 | benign | -0.47 | Destabilizing | 0.004 | N | 0.215 | neutral | None | None | None | None | I |
P/L | 0.0849 | likely_benign | 0.0809 | benign | -0.345 | Destabilizing | 0.001 | N | 0.214 | neutral | N | 0.430579311 | None | None | I |
P/M | 0.1784 | likely_benign | 0.1811 | benign | -0.331 | Destabilizing | 0.497 | N | 0.337 | neutral | None | None | None | None | I |
P/N | 0.1457 | likely_benign | 0.1455 | benign | -0.193 | Destabilizing | 0.124 | N | 0.37 | neutral | None | None | None | None | I |
P/Q | 0.1037 | likely_benign | 0.0949 | benign | -0.456 | Destabilizing | 0.22 | N | 0.377 | neutral | None | None | None | None | I |
P/R | 0.1069 | likely_benign | 0.1004 | benign | 0.081 | Stabilizing | 0.003 | N | 0.194 | neutral | N | 0.423114621 | None | None | I |
P/S | 0.082 | likely_benign | 0.0755 | benign | -0.583 | Destabilizing | None | N | 0.16 | neutral | N | 0.444164683 | None | None | I |
P/T | 0.0793 | likely_benign | 0.0729 | benign | -0.59 | Destabilizing | 0.042 | N | 0.263 | neutral | N | 0.45897942 | None | None | I |
P/V | 0.1276 | likely_benign | 0.1261 | benign | -0.391 | Destabilizing | None | N | 0.143 | neutral | None | None | None | None | I |
P/W | 0.3543 | ambiguous | 0.3471 | ambiguous | -0.862 | Destabilizing | 0.958 | D | 0.373 | neutral | None | None | None | None | I |
P/Y | 0.2074 | likely_benign | 0.201 | benign | -0.561 | Destabilizing | 0.667 | D | 0.356 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.