Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8050 | 24373;24374;24375 | chr2:178719242;178719241;178719240 | chr2:179583969;179583968;179583967 |
N2AB | 7733 | 23422;23423;23424 | chr2:178719242;178719241;178719240 | chr2:179583969;179583968;179583967 |
N2A | 6806 | 20641;20642;20643 | chr2:178719242;178719241;178719240 | chr2:179583969;179583968;179583967 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs2077970288 | None | 0.984 | N | 0.452 | 0.339 | 0.166414681773 | gnomAD-4.0.0 | 3.42104E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69844E-06 | 0 | 3.31323E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0682 | likely_benign | 0.0689 | benign | -0.222 | Destabilizing | 0.103 | N | 0.153 | neutral | N | 0.48793689 | None | None | I |
S/C | 0.1583 | likely_benign | 0.1491 | benign | -0.231 | Destabilizing | 0.999 | D | 0.5 | neutral | N | 0.512250286 | None | None | I |
S/D | 0.1914 | likely_benign | 0.19 | benign | 0.048 | Stabilizing | 0.034 | N | 0.22 | neutral | None | None | None | None | I |
S/E | 0.2492 | likely_benign | 0.2584 | benign | -0.061 | Destabilizing | 0.851 | D | 0.379 | neutral | None | None | None | None | I |
S/F | 0.1368 | likely_benign | 0.1422 | benign | -0.923 | Destabilizing | 0.984 | D | 0.566 | neutral | N | 0.47990289 | None | None | I |
S/G | 0.0753 | likely_benign | 0.0735 | benign | -0.29 | Destabilizing | 0.702 | D | 0.38 | neutral | None | None | None | None | I |
S/H | 0.2261 | likely_benign | 0.2324 | benign | -0.715 | Destabilizing | 0.999 | D | 0.483 | neutral | None | None | None | None | I |
S/I | 0.1386 | likely_benign | 0.1404 | benign | -0.176 | Destabilizing | 0.976 | D | 0.549 | neutral | None | None | None | None | I |
S/K | 0.3205 | likely_benign | 0.3345 | benign | -0.368 | Destabilizing | 0.919 | D | 0.403 | neutral | None | None | None | None | I |
S/L | 0.0834 | likely_benign | 0.0887 | benign | -0.176 | Destabilizing | 0.851 | D | 0.456 | neutral | None | None | None | None | I |
S/M | 0.1705 | likely_benign | 0.1742 | benign | 0.016 | Stabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | I |
S/N | 0.1028 | likely_benign | 0.1027 | benign | -0.082 | Destabilizing | 0.919 | D | 0.457 | neutral | None | None | None | None | I |
S/P | 0.1864 | likely_benign | 0.192 | benign | -0.165 | Destabilizing | 0.984 | D | 0.452 | neutral | N | 0.493639052 | None | None | I |
S/Q | 0.2981 | likely_benign | 0.3056 | benign | -0.348 | Destabilizing | 0.988 | D | 0.458 | neutral | None | None | None | None | I |
S/R | 0.2657 | likely_benign | 0.2677 | benign | -0.112 | Destabilizing | 0.976 | D | 0.479 | neutral | None | None | None | None | I |
S/T | 0.0735 | likely_benign | 0.0741 | benign | -0.198 | Destabilizing | 0.026 | N | 0.201 | neutral | N | 0.469159128 | None | None | I |
S/V | 0.1411 | likely_benign | 0.1461 | benign | -0.165 | Destabilizing | 0.851 | D | 0.443 | neutral | None | None | None | None | I |
S/W | 0.2211 | likely_benign | 0.2218 | benign | -0.972 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
S/Y | 0.1497 | likely_benign | 0.1504 | benign | -0.668 | Destabilizing | 0.995 | D | 0.564 | neutral | N | 0.471015346 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.