Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8053 | 24382;24383;24384 | chr2:178719233;178719232;178719231 | chr2:179583960;179583959;179583958 |
N2AB | 7736 | 23431;23432;23433 | chr2:178719233;178719232;178719231 | chr2:179583960;179583959;179583958 |
N2A | 6809 | 20650;20651;20652 | chr2:178719233;178719232;178719231 | chr2:179583960;179583959;179583958 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs374167223 | -0.954 | 1.0 | D | 0.825 | 0.635 | None | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 4.45E-05 | 0 |
G/S | rs374167223 | -0.954 | 1.0 | D | 0.825 | 0.635 | None | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.0292E-04 | 0 | 0 |
G/S | rs374167223 | -0.954 | 1.0 | D | 0.825 | 0.635 | None | gnomAD-4.0.0 | 2.91261E-05 | None | None | None | None | I | None | 0 | 1.66694E-05 | None | 0 | 4.45653E-05 | None | 0 | 1.64582E-04 | 3.47527E-05 | 0 | 3.20205E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2244 | likely_benign | 0.2432 | benign | -0.709 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.57261225 | None | None | I |
G/C | 0.5449 | ambiguous | 0.5133 | ambiguous | -0.951 | Destabilizing | 1.0 | D | 0.774 | deleterious | D | 0.662267089 | None | None | I |
G/D | 0.557 | ambiguous | 0.5762 | pathogenic | -1.15 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.613573233 | None | None | I |
G/E | 0.6264 | likely_pathogenic | 0.6622 | pathogenic | -1.156 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
G/F | 0.9124 | likely_pathogenic | 0.9231 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
G/H | 0.743 | likely_pathogenic | 0.7787 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
G/I | 0.8389 | likely_pathogenic | 0.8636 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
G/K | 0.6816 | likely_pathogenic | 0.7236 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
G/L | 0.818 | likely_pathogenic | 0.8469 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
G/M | 0.8447 | likely_pathogenic | 0.8715 | pathogenic | -0.191 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
G/N | 0.5705 | likely_pathogenic | 0.6155 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
G/P | 0.9892 | likely_pathogenic | 0.9883 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
G/Q | 0.6488 | likely_pathogenic | 0.687 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/R | 0.5085 | ambiguous | 0.5562 | ambiguous | -0.932 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.662065285 | None | None | I |
G/S | 0.1675 | likely_benign | 0.1867 | benign | -1.253 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.645642315 | None | None | I |
G/T | 0.5252 | ambiguous | 0.573 | pathogenic | -1.166 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
G/V | 0.6942 | likely_pathogenic | 0.7183 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.662267089 | None | None | I |
G/W | 0.866 | likely_pathogenic | 0.8734 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
G/Y | 0.8447 | likely_pathogenic | 0.8595 | pathogenic | -0.941 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.