Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8055 | 24388;24389;24390 | chr2:178719227;178719226;178719225 | chr2:179583954;179583953;179583952 |
N2AB | 7738 | 23437;23438;23439 | chr2:178719227;178719226;178719225 | chr2:179583954;179583953;179583952 |
N2A | 6811 | 20656;20657;20658 | chr2:178719227;178719226;178719225 | chr2:179583954;179583953;179583952 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1160062455 | -2.559 | 0.999 | D | 0.729 | 0.863 | 0.78574696606 | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.29668E-04 | 0 |
Y/H | rs1160062455 | -2.559 | 0.999 | D | 0.729 | 0.863 | 0.78574696606 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
Y/H | rs1160062455 | -2.559 | 0.999 | D | 0.729 | 0.863 | 0.78574696606 | gnomAD-4.0.0 | 6.40561E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.19657E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9333 | likely_pathogenic | 0.948 | pathogenic | -2.586 | Highly Destabilizing | 0.991 | D | 0.833 | deleterious | None | None | None | None | N |
Y/C | 0.484 | ambiguous | 0.4481 | ambiguous | -1.909 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.664567299 | None | None | N |
Y/D | 0.9806 | likely_pathogenic | 0.9868 | pathogenic | -3.126 | Highly Destabilizing | 0.999 | D | 0.882 | deleterious | D | 0.664567299 | None | None | N |
Y/E | 0.9885 | likely_pathogenic | 0.9925 | pathogenic | -2.876 | Highly Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
Y/F | 0.0927 | likely_benign | 0.0892 | benign | -0.946 | Destabilizing | 0.117 | N | 0.408 | neutral | D | 0.579000342 | None | None | N |
Y/G | 0.9475 | likely_pathogenic | 0.9566 | pathogenic | -3.053 | Highly Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
Y/H | 0.662 | likely_pathogenic | 0.7165 | pathogenic | -2.228 | Highly Destabilizing | 0.999 | D | 0.729 | prob.delet. | D | 0.648113969 | None | None | N |
Y/I | 0.5913 | likely_pathogenic | 0.6207 | pathogenic | -1.04 | Destabilizing | 0.99 | D | 0.803 | deleterious | None | None | None | None | N |
Y/K | 0.9751 | likely_pathogenic | 0.9828 | pathogenic | -2.106 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
Y/L | 0.5676 | likely_pathogenic | 0.6061 | pathogenic | -1.04 | Destabilizing | 0.966 | D | 0.763 | deleterious | None | None | None | None | N |
Y/M | 0.8399 | likely_pathogenic | 0.862 | pathogenic | -1.092 | Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | N |
Y/N | 0.8573 | likely_pathogenic | 0.896 | pathogenic | -3.037 | Highly Destabilizing | 0.999 | D | 0.873 | deleterious | D | 0.664567299 | None | None | N |
Y/P | 0.9895 | likely_pathogenic | 0.9898 | pathogenic | -1.572 | Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
Y/Q | 0.953 | likely_pathogenic | 0.9679 | pathogenic | -2.606 | Highly Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
Y/R | 0.9147 | likely_pathogenic | 0.9357 | pathogenic | -2.255 | Highly Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
Y/S | 0.833 | likely_pathogenic | 0.8638 | pathogenic | -3.388 | Highly Destabilizing | 0.997 | D | 0.87 | deleterious | D | 0.664567299 | None | None | N |
Y/T | 0.9157 | likely_pathogenic | 0.932 | pathogenic | -2.989 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
Y/V | 0.5143 | ambiguous | 0.5492 | ambiguous | -1.572 | Destabilizing | 0.983 | D | 0.785 | deleterious | None | None | None | None | N |
Y/W | 0.6178 | likely_pathogenic | 0.6159 | pathogenic | -0.298 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.