Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8059 | 24400;24401;24402 | chr2:178719215;178719214;178719213 | chr2:179583942;179583941;179583940 |
N2AB | 7742 | 23449;23450;23451 | chr2:178719215;178719214;178719213 | chr2:179583942;179583941;179583940 |
N2A | 6815 | 20668;20669;20670 | chr2:178719215;178719214;178719213 | chr2:179583942;179583941;179583940 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.996 | D | 0.709 | 0.554 | 0.638834684723 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
A/V | rs1301357470 | -0.312 | 0.984 | D | 0.603 | 0.436 | 0.665914354922 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
A/V | rs1301357470 | -0.312 | 0.984 | D | 0.603 | 0.436 | 0.665914354922 | gnomAD-4.0.0 | 1.59136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85856E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8877 | likely_pathogenic | 0.883 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
A/D | 0.9936 | likely_pathogenic | 0.9955 | pathogenic | -2.475 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.653626995 | None | None | N |
A/E | 0.9859 | likely_pathogenic | 0.9889 | pathogenic | -2.337 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
A/F | 0.9206 | likely_pathogenic | 0.9405 | pathogenic | -0.99 | Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
A/G | 0.4638 | ambiguous | 0.4725 | ambiguous | -1.761 | Destabilizing | 0.999 | D | 0.651 | neutral | D | 0.604933139 | None | None | N |
A/H | 0.9937 | likely_pathogenic | 0.9954 | pathogenic | -1.973 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
A/I | 0.6878 | likely_pathogenic | 0.6978 | pathogenic | -0.248 | Destabilizing | 0.988 | D | 0.751 | deleterious | None | None | None | None | N |
A/K | 0.9964 | likely_pathogenic | 0.9974 | pathogenic | -1.492 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/L | 0.624 | likely_pathogenic | 0.6239 | pathogenic | -0.248 | Destabilizing | 0.335 | N | 0.437 | neutral | None | None | None | None | N |
A/M | 0.7747 | likely_pathogenic | 0.7915 | pathogenic | -0.495 | Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
A/N | 0.9877 | likely_pathogenic | 0.9905 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
A/P | 0.9785 | likely_pathogenic | 0.9835 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.63740583 | None | None | N |
A/Q | 0.9823 | likely_pathogenic | 0.9851 | pathogenic | -1.605 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
A/R | 0.9861 | likely_pathogenic | 0.9892 | pathogenic | -1.384 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
A/S | 0.3947 | ambiguous | 0.4125 | ambiguous | -2.093 | Highly Destabilizing | 0.999 | D | 0.633 | neutral | D | 0.620750695 | None | None | N |
A/T | 0.4722 | ambiguous | 0.4746 | ambiguous | -1.841 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | D | 0.636800417 | None | None | N |
A/V | 0.3258 | likely_benign | 0.318 | benign | -0.57 | Destabilizing | 0.984 | D | 0.603 | neutral | D | 0.540031163 | None | None | N |
A/W | 0.996 | likely_pathogenic | 0.9973 | pathogenic | -1.612 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
A/Y | 0.9857 | likely_pathogenic | 0.9899 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.