Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8062 | 24409;24410;24411 | chr2:178719206;178719205;178719204 | chr2:179583933;179583932;179583931 |
N2AB | 7745 | 23458;23459;23460 | chr2:178719206;178719205;178719204 | chr2:179583933;179583932;179583931 |
N2A | 6818 | 20677;20678;20679 | chr2:178719206;178719205;178719204 | chr2:179583933;179583932;179583931 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs879134005 | -0.081 | 0.003 | N | 0.22 | 0.055 | 0.156986980423 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs879134005 | -0.081 | 0.003 | N | 0.22 | 0.055 | 0.156986980423 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | I | None | 5.65675E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0952 | likely_benign | 0.1043 | benign | -0.387 | Destabilizing | None | N | 0.113 | neutral | N | 0.414288146 | None | None | I |
V/C | 0.6933 | likely_pathogenic | 0.7336 | pathogenic | -0.847 | Destabilizing | 0.667 | D | 0.27 | neutral | None | None | None | None | I |
V/D | 0.1873 | likely_benign | 0.2006 | benign | -0.44 | Destabilizing | 0.124 | N | 0.277 | neutral | None | None | None | None | I |
V/E | 0.1236 | likely_benign | 0.1671 | benign | -0.561 | Destabilizing | 0.003 | N | 0.205 | neutral | N | 0.401433492 | None | None | I |
V/F | 0.1615 | likely_benign | 0.147 | benign | -0.777 | Destabilizing | 0.331 | N | 0.293 | neutral | None | None | None | None | I |
V/G | 0.1709 | likely_benign | 0.1759 | benign | -0.436 | Destabilizing | 0.096 | N | 0.281 | neutral | N | 0.477742192 | None | None | I |
V/H | 0.3667 | ambiguous | 0.4251 | ambiguous | -0.038 | Destabilizing | 0.859 | D | 0.211 | neutral | None | None | None | None | I |
V/I | 0.0759 | likely_benign | 0.0782 | benign | -0.398 | Destabilizing | 0.003 | N | 0.22 | neutral | N | 0.485265597 | None | None | I |
V/K | 0.1595 | likely_benign | 0.2155 | benign | -0.441 | Destabilizing | 0.002 | N | 0.121 | neutral | None | None | None | None | I |
V/L | 0.1524 | likely_benign | 0.167 | benign | -0.398 | Destabilizing | None | N | 0.148 | neutral | N | 0.488420546 | None | None | I |
V/M | 0.1013 | likely_benign | 0.1134 | benign | -0.595 | Destabilizing | 0.009 | N | 0.177 | neutral | None | None | None | None | I |
V/N | 0.1806 | likely_benign | 0.2022 | benign | -0.261 | Destabilizing | 0.22 | N | 0.27 | neutral | None | None | None | None | I |
V/P | 0.3931 | ambiguous | 0.4149 | ambiguous | -0.367 | Destabilizing | 0.364 | N | 0.293 | neutral | None | None | None | None | I |
V/Q | 0.1785 | likely_benign | 0.2275 | benign | -0.484 | Destabilizing | 0.22 | N | 0.294 | neutral | None | None | None | None | I |
V/R | 0.1554 | likely_benign | 0.1854 | benign | 0.03 | Stabilizing | 0.124 | N | 0.278 | neutral | None | None | None | None | I |
V/S | 0.1407 | likely_benign | 0.1506 | benign | -0.556 | Destabilizing | 0.055 | N | 0.237 | neutral | None | None | None | None | I |
V/T | 0.1091 | likely_benign | 0.1234 | benign | -0.588 | Destabilizing | 0.001 | N | 0.217 | neutral | None | None | None | None | I |
V/W | 0.6952 | likely_pathogenic | 0.7061 | pathogenic | -0.824 | Destabilizing | 0.958 | D | 0.221 | neutral | None | None | None | None | I |
V/Y | 0.4189 | ambiguous | 0.4429 | ambiguous | -0.56 | Destabilizing | 0.667 | D | 0.271 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.