Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8066 | 24421;24422;24423 | chr2:178719194;178719193;178719192 | chr2:179583921;179583920;179583919 |
N2AB | 7749 | 23470;23471;23472 | chr2:178719194;178719193;178719192 | chr2:179583921;179583920;179583919 |
N2A | 6822 | 20689;20690;20691 | chr2:178719194;178719193;178719192 | chr2:179583921;179583920;179583919 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs755202091 | -0.588 | 0.426 | N | 0.442 | 0.267 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 6.48E-05 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
D/N | rs755202091 | -0.588 | 0.426 | N | 0.442 | 0.267 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 1.20691E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs755202091 | -0.588 | 0.426 | N | 0.442 | 0.267 | None | gnomAD-4.0.0 | 1.73544E-05 | None | None | None | None | I | None | 6.67628E-05 | 5.00117E-05 | None | 0 | 0 | None | 0 | 1.64582E-04 | 1.6107E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1732 | likely_benign | 0.1654 | benign | -0.611 | Destabilizing | None | N | 0.361 | neutral | N | 0.431796472 | None | None | I |
D/C | 0.7047 | likely_pathogenic | 0.7152 | pathogenic | -0.235 | Destabilizing | 0.001 | N | 0.425 | neutral | None | None | None | None | I |
D/E | 0.2701 | likely_benign | 0.2323 | benign | -0.699 | Destabilizing | None | N | 0.089 | neutral | D | 0.530517884 | None | None | I |
D/F | 0.7703 | likely_pathogenic | 0.7634 | pathogenic | -0.21 | Destabilizing | 0.555 | D | 0.627 | neutral | None | None | None | None | I |
D/G | 0.2348 | likely_benign | 0.225 | benign | -0.956 | Destabilizing | 0.027 | N | 0.503 | neutral | N | 0.496203396 | None | None | I |
D/H | 0.4258 | ambiguous | 0.4072 | ambiguous | -0.481 | Destabilizing | 0.705 | D | 0.511 | neutral | N | 0.509534711 | None | None | I |
D/I | 0.5509 | ambiguous | 0.5319 | ambiguous | 0.303 | Stabilizing | 0.38 | N | 0.635 | neutral | None | None | None | None | I |
D/K | 0.4691 | ambiguous | 0.4403 | ambiguous | -0.275 | Destabilizing | 0.081 | N | 0.517 | neutral | None | None | None | None | I |
D/L | 0.5638 | ambiguous | 0.5423 | ambiguous | 0.303 | Stabilizing | 0.081 | N | 0.627 | neutral | None | None | None | None | I |
D/M | 0.713 | likely_pathogenic | 0.725 | pathogenic | 0.704 | Stabilizing | 0.935 | D | 0.592 | neutral | None | None | None | None | I |
D/N | 0.1287 | likely_benign | 0.1224 | benign | -0.734 | Destabilizing | 0.426 | N | 0.442 | neutral | N | 0.490581082 | None | None | I |
D/P | 0.9707 | likely_pathogenic | 0.9664 | pathogenic | 0.023 | Stabilizing | 0.555 | D | 0.551 | neutral | None | None | None | None | I |
D/Q | 0.4472 | ambiguous | 0.4112 | ambiguous | -0.619 | Destabilizing | 0.235 | N | 0.497 | neutral | None | None | None | None | I |
D/R | 0.4915 | ambiguous | 0.4567 | ambiguous | -0.109 | Destabilizing | 0.235 | N | 0.619 | neutral | None | None | None | None | I |
D/S | 0.1194 | likely_benign | 0.1174 | benign | -0.985 | Destabilizing | 0.007 | N | 0.16 | neutral | None | None | None | None | I |
D/T | 0.319 | likely_benign | 0.3099 | benign | -0.699 | Destabilizing | 0.081 | N | 0.495 | neutral | None | None | None | None | I |
D/V | 0.3184 | likely_benign | 0.3005 | benign | 0.023 | Stabilizing | 0.062 | N | 0.622 | neutral | N | 0.468237274 | None | None | I |
D/W | 0.9497 | likely_pathogenic | 0.9477 | pathogenic | 0.003 | Stabilizing | 0.935 | D | 0.653 | neutral | None | None | None | None | I |
D/Y | 0.4081 | ambiguous | 0.3969 | ambiguous | 0.054 | Stabilizing | 0.879 | D | 0.628 | neutral | N | 0.52130909 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.