Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8067 | 24424;24425;24426 | chr2:178719191;178719190;178719189 | chr2:179583918;179583917;179583916 |
N2AB | 7750 | 23473;23474;23475 | chr2:178719191;178719190;178719189 | chr2:179583918;179583917;179583916 |
N2A | 6823 | 20692;20693;20694 | chr2:178719191;178719190;178719189 | chr2:179583918;179583917;179583916 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1319416113 | None | 0.014 | D | 0.285 | 0.241 | 0.149567049428 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1319416113 | None | 0.014 | D | 0.285 | 0.241 | 0.149567049428 | gnomAD-4.0.0 | 6.57315E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4705E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1302 | likely_benign | 0.1479 | benign | -0.694 | Destabilizing | 0.698 | D | 0.61 | neutral | D | 0.53183018 | None | None | I |
E/C | 0.7945 | likely_pathogenic | 0.8501 | pathogenic | -0.203 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | I |
E/D | 0.1652 | likely_benign | 0.1849 | benign | -0.57 | Destabilizing | 0.014 | N | 0.285 | neutral | D | 0.533254332 | None | None | I |
E/F | 0.6332 | likely_pathogenic | 0.7121 | pathogenic | -0.293 | Destabilizing | 0.993 | D | 0.688 | prob.neutral | None | None | None | None | I |
E/G | 0.1796 | likely_benign | 0.1934 | benign | -0.961 | Destabilizing | 0.822 | D | 0.594 | neutral | D | 0.525680864 | None | None | I |
E/H | 0.3326 | likely_benign | 0.3948 | ambiguous | -0.208 | Destabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | I |
E/I | 0.2886 | likely_benign | 0.3604 | ambiguous | 0.004 | Stabilizing | 0.978 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/K | 0.0896 | likely_benign | 0.1044 | benign | 0.124 | Stabilizing | 0.822 | D | 0.546 | neutral | D | 0.532944901 | None | None | I |
E/L | 0.3713 | ambiguous | 0.4584 | ambiguous | 0.004 | Stabilizing | 0.978 | D | 0.666 | neutral | None | None | None | None | I |
E/M | 0.3559 | ambiguous | 0.4414 | ambiguous | 0.241 | Stabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | I |
E/N | 0.2447 | likely_benign | 0.2917 | benign | -0.396 | Destabilizing | 0.754 | D | 0.583 | neutral | None | None | None | None | I |
E/P | 0.8795 | likely_pathogenic | 0.9005 | pathogenic | -0.209 | Destabilizing | 0.978 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/Q | 0.1055 | likely_benign | 0.1179 | benign | -0.32 | Destabilizing | 0.942 | D | 0.617 | neutral | N | 0.486500535 | None | None | I |
E/R | 0.1605 | likely_benign | 0.1903 | benign | 0.382 | Stabilizing | 0.978 | D | 0.635 | neutral | None | None | None | None | I |
E/S | 0.1611 | likely_benign | 0.1764 | benign | -0.578 | Destabilizing | 0.193 | N | 0.386 | neutral | None | None | None | None | I |
E/T | 0.1424 | likely_benign | 0.1717 | benign | -0.349 | Destabilizing | 0.754 | D | 0.656 | neutral | None | None | None | None | I |
E/V | 0.1729 | likely_benign | 0.2101 | benign | -0.209 | Destabilizing | 0.971 | D | 0.666 | neutral | D | 0.538622866 | None | None | I |
E/W | 0.8583 | likely_pathogenic | 0.9032 | pathogenic | -0.011 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | I |
E/Y | 0.509 | ambiguous | 0.5968 | pathogenic | -0.014 | Destabilizing | 0.993 | D | 0.698 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.