Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8069 | 24430;24431;24432 | chr2:178719185;178719184;178719183 | chr2:179583912;179583911;179583910 |
N2AB | 7752 | 23479;23480;23481 | chr2:178719185;178719184;178719183 | chr2:179583912;179583911;179583910 |
N2A | 6825 | 20698;20699;20700 | chr2:178719185;178719184;178719183 | chr2:179583912;179583911;179583910 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs751657368 | 0.15 | 0.896 | N | 0.621 | 0.383 | 0.59202398213 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.98E-06 | 1.66556E-04 |
S/L | rs751657368 | 0.15 | 0.896 | N | 0.621 | 0.383 | 0.59202398213 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/L | rs751657368 | 0.15 | 0.896 | N | 0.621 | 0.383 | 0.59202398213 | gnomAD-4.0.0 | 3.84483E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39425E-06 | 0 | 5.69022E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0968 | likely_benign | 0.1033 | benign | -0.582 | Destabilizing | 0.026 | N | 0.284 | neutral | D | 0.530288598 | None | None | N |
S/C | 0.1543 | likely_benign | 0.1645 | benign | -0.379 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
S/D | 0.302 | likely_benign | 0.3357 | benign | -0.109 | Destabilizing | 0.959 | D | 0.505 | neutral | None | None | None | None | N |
S/E | 0.3366 | likely_benign | 0.3803 | ambiguous | -0.147 | Destabilizing | 0.919 | D | 0.474 | neutral | None | None | None | None | N |
S/F | 0.1768 | likely_benign | 0.213 | benign | -0.855 | Destabilizing | 0.988 | D | 0.718 | prob.delet. | None | None | None | None | N |
S/G | 0.0918 | likely_benign | 0.1028 | benign | -0.795 | Destabilizing | 0.851 | D | 0.475 | neutral | None | None | None | None | N |
S/H | 0.2078 | likely_benign | 0.2361 | benign | -1.327 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
S/I | 0.1685 | likely_benign | 0.1987 | benign | -0.134 | Destabilizing | 0.976 | D | 0.706 | prob.neutral | None | None | None | None | N |
S/K | 0.3005 | likely_benign | 0.3517 | ambiguous | -0.686 | Destabilizing | 0.851 | D | 0.491 | neutral | None | None | None | None | N |
S/L | 0.1164 | likely_benign | 0.131 | benign | -0.134 | Destabilizing | 0.896 | D | 0.621 | neutral | N | 0.493027072 | None | None | N |
S/M | 0.2166 | likely_benign | 0.2409 | benign | 0.169 | Stabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
S/N | 0.1089 | likely_benign | 0.1211 | benign | -0.505 | Destabilizing | 0.959 | D | 0.53 | neutral | None | None | None | None | N |
S/P | 0.4796 | ambiguous | 0.4743 | ambiguous | -0.25 | Destabilizing | 0.984 | D | 0.623 | neutral | N | 0.519943191 | None | None | N |
S/Q | 0.283 | likely_benign | 0.3256 | benign | -0.713 | Destabilizing | 0.988 | D | 0.529 | neutral | None | None | None | None | N |
S/R | 0.2014 | likely_benign | 0.2369 | benign | -0.54 | Destabilizing | 0.261 | N | 0.365 | neutral | None | None | None | None | N |
S/T | 0.0804 | likely_benign | 0.0834 | benign | -0.561 | Destabilizing | 0.103 | N | 0.37 | neutral | N | 0.481206572 | None | None | N |
S/V | 0.189 | likely_benign | 0.2118 | benign | -0.25 | Destabilizing | 0.851 | D | 0.643 | neutral | None | None | None | None | N |
S/W | 0.3293 | likely_benign | 0.3767 | ambiguous | -0.826 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
S/Y | 0.1716 | likely_benign | 0.2004 | benign | -0.572 | Destabilizing | 0.996 | D | 0.721 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.