Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8070 | 24433;24434;24435 | chr2:178719182;178719181;178719180 | chr2:179583909;179583908;179583907 |
N2AB | 7753 | 23482;23483;23484 | chr2:178719182;178719181;178719180 | chr2:179583909;179583908;179583907 |
N2A | 6826 | 20701;20702;20703 | chr2:178719182;178719181;178719180 | chr2:179583909;179583908;179583907 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | rs796067887 | -1.302 | 0.059 | D | 0.49 | 0.497 | 0.470810165807 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 1.14705E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/E | rs796067887 | -1.302 | 0.059 | D | 0.49 | 0.497 | 0.470810165807 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/E | rs796067887 | -1.302 | 0.059 | D | 0.49 | 0.497 | 0.470810165807 | gnomAD-4.0.0 | 6.5716E-06 | None | None | None | None | I | None | 2.41231E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6645 | likely_pathogenic | 0.6901 | pathogenic | -1.159 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | I |
A/D | 0.8593 | likely_pathogenic | 0.8712 | pathogenic | -1.418 | Destabilizing | 0.851 | D | 0.776 | deleterious | None | None | None | None | I |
A/E | 0.8747 | likely_pathogenic | 0.8714 | pathogenic | -1.387 | Destabilizing | 0.059 | N | 0.49 | neutral | D | 0.550826238 | None | None | I |
A/F | 0.8148 | likely_pathogenic | 0.8373 | pathogenic | -1.005 | Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | I |
A/G | 0.1757 | likely_benign | 0.1945 | benign | -1.336 | Destabilizing | 0.011 | N | 0.273 | neutral | N | 0.491082196 | None | None | I |
A/H | 0.9232 | likely_pathogenic | 0.9274 | pathogenic | -1.562 | Destabilizing | 0.997 | D | 0.761 | deleterious | None | None | None | None | I |
A/I | 0.6264 | likely_pathogenic | 0.6683 | pathogenic | -0.237 | Destabilizing | 0.976 | D | 0.781 | deleterious | None | None | None | None | I |
A/K | 0.9392 | likely_pathogenic | 0.9343 | pathogenic | -1.234 | Destabilizing | 0.851 | D | 0.771 | deleterious | None | None | None | None | I |
A/L | 0.5473 | ambiguous | 0.5869 | pathogenic | -0.237 | Destabilizing | 0.919 | D | 0.764 | deleterious | None | None | None | None | I |
A/M | 0.5239 | ambiguous | 0.5635 | ambiguous | -0.29 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | I |
A/N | 0.798 | likely_pathogenic | 0.8193 | pathogenic | -1.118 | Destabilizing | 0.976 | D | 0.776 | deleterious | None | None | None | None | I |
A/P | 0.9745 | likely_pathogenic | 0.9747 | pathogenic | -0.45 | Destabilizing | 0.984 | D | 0.774 | deleterious | D | 0.551079727 | None | None | I |
A/Q | 0.8689 | likely_pathogenic | 0.8631 | pathogenic | -1.183 | Destabilizing | 0.952 | D | 0.786 | deleterious | None | None | None | None | I |
A/R | 0.8792 | likely_pathogenic | 0.8666 | pathogenic | -1.021 | Destabilizing | 0.976 | D | 0.775 | deleterious | None | None | None | None | I |
A/S | 0.1465 | likely_benign | 0.1523 | benign | -1.548 | Destabilizing | 0.811 | D | 0.615 | neutral | D | 0.525501641 | None | None | I |
A/T | 0.1576 | likely_benign | 0.1681 | benign | -1.405 | Destabilizing | 0.211 | N | 0.429 | neutral | N | 0.504209247 | None | None | I |
A/V | 0.2989 | likely_benign | 0.3168 | benign | -0.45 | Destabilizing | 0.896 | D | 0.663 | neutral | N | 0.515185859 | None | None | I |
A/W | 0.9734 | likely_pathogenic | 0.9782 | pathogenic | -1.447 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | I |
A/Y | 0.902 | likely_pathogenic | 0.9177 | pathogenic | -0.989 | Destabilizing | 0.996 | D | 0.779 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.