Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8074 | 24445;24446;24447 | chr2:178719170;178719169;178719168 | chr2:179583897;179583896;179583895 |
N2AB | 7757 | 23494;23495;23496 | chr2:178719170;178719169;178719168 | chr2:179583897;179583896;179583895 |
N2A | 6830 | 20713;20714;20715 | chr2:178719170;178719169;178719168 | chr2:179583897;179583896;179583895 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.781 | D | 0.71 | 0.826 | 0.902821803296 | gnomAD-4.0.0 | 1.59873E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43649E-05 | 0 |
V/L | None | None | 0.034 | D | 0.633 | 0.477 | 0.597125599913 | gnomAD-4.0.0 | 1.3712E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01247E-07 | 1.16271E-05 | 0 |
V/M | rs763504178 | -0.532 | 0.638 | D | 0.725 | 0.57 | 0.747430590049 | gnomAD-2.1.1 | 1.63E-05 | None | None | None | None | I | None | 0 | 1.16218E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/M | rs763504178 | -0.532 | 0.638 | D | 0.725 | 0.57 | 0.747430590049 | gnomAD-4.0.0 | 2.7424E-06 | None | None | None | None | I | None | 0 | 8.95696E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5429 | ambiguous | 0.549 | ambiguous | -1.836 | Destabilizing | 0.334 | N | 0.608 | neutral | D | 0.64869974 | None | None | I |
V/C | 0.9212 | likely_pathogenic | 0.9342 | pathogenic | -1.703 | Destabilizing | 0.982 | D | 0.709 | prob.delet. | None | None | None | None | I |
V/D | 0.9692 | likely_pathogenic | 0.9764 | pathogenic | -2.567 | Highly Destabilizing | 0.826 | D | 0.739 | prob.delet. | None | None | None | None | I |
V/E | 0.9132 | likely_pathogenic | 0.9253 | pathogenic | -2.514 | Highly Destabilizing | 0.781 | D | 0.71 | prob.delet. | D | 0.649305153 | None | None | I |
V/F | 0.5177 | ambiguous | 0.6057 | pathogenic | -1.426 | Destabilizing | 0.7 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/G | 0.7569 | likely_pathogenic | 0.7579 | pathogenic | -2.194 | Highly Destabilizing | 0.781 | D | 0.714 | prob.delet. | D | 0.649305153 | None | None | I |
V/H | 0.9656 | likely_pathogenic | 0.9764 | pathogenic | -1.738 | Destabilizing | 0.982 | D | 0.739 | prob.delet. | None | None | None | None | I |
V/I | 0.0707 | likely_benign | 0.0873 | benign | -0.911 | Destabilizing | 0.002 | N | 0.489 | neutral | None | None | None | None | I |
V/K | 0.9199 | likely_pathogenic | 0.9359 | pathogenic | -1.548 | Destabilizing | 0.826 | D | 0.711 | prob.delet. | None | None | None | None | I |
V/L | 0.2816 | likely_benign | 0.3737 | ambiguous | -0.911 | Destabilizing | 0.034 | N | 0.633 | neutral | D | 0.595605474 | None | None | I |
V/M | 0.2866 | likely_benign | 0.3531 | ambiguous | -0.917 | Destabilizing | 0.638 | D | 0.725 | prob.delet. | D | 0.623363433 | None | None | I |
V/N | 0.8713 | likely_pathogenic | 0.9106 | pathogenic | -1.602 | Destabilizing | 0.935 | D | 0.747 | deleterious | None | None | None | None | I |
V/P | 0.8732 | likely_pathogenic | 0.8887 | pathogenic | -1.189 | Destabilizing | 0.935 | D | 0.721 | prob.delet. | None | None | None | None | I |
V/Q | 0.8996 | likely_pathogenic | 0.9176 | pathogenic | -1.755 | Destabilizing | 0.935 | D | 0.732 | prob.delet. | None | None | None | None | I |
V/R | 0.8851 | likely_pathogenic | 0.8991 | pathogenic | -1.074 | Destabilizing | 0.826 | D | 0.745 | deleterious | None | None | None | None | I |
V/S | 0.735 | likely_pathogenic | 0.7614 | pathogenic | -2.093 | Highly Destabilizing | 0.826 | D | 0.683 | prob.neutral | None | None | None | None | I |
V/T | 0.5843 | likely_pathogenic | 0.6157 | pathogenic | -1.931 | Destabilizing | 0.399 | N | 0.672 | neutral | None | None | None | None | I |
V/W | 0.9754 | likely_pathogenic | 0.9842 | pathogenic | -1.709 | Destabilizing | 0.982 | D | 0.711 | prob.delet. | None | None | None | None | I |
V/Y | 0.9216 | likely_pathogenic | 0.9493 | pathogenic | -1.39 | Destabilizing | 0.826 | D | 0.703 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.