Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8079 | 24460;24461;24462 | chr2:178718965;178718964;178718963 | chr2:179583692;179583691;179583690 |
N2AB | 7762 | 23509;23510;23511 | chr2:178718965;178718964;178718963 | chr2:179583692;179583691;179583690 |
N2A | 6835 | 20728;20729;20730 | chr2:178718965;178718964;178718963 | chr2:179583692;179583691;179583690 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 1.0 | N | 0.837 | 0.44 | 0.713362601676 | gnomAD-4.0.0 | 2.06633E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.71006E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0928 | likely_benign | 0.0904 | benign | -0.428 | Destabilizing | 0.997 | D | 0.453 | neutral | N | 0.486275441 | None | None | N |
S/C | 0.184 | likely_benign | 0.158 | benign | -0.376 | Destabilizing | 1.0 | D | 0.778 | deleterious | N | 0.511434042 | None | None | N |
S/D | 0.5554 | ambiguous | 0.534 | ambiguous | 0.519 | Stabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
S/E | 0.5505 | ambiguous | 0.5629 | ambiguous | 0.534 | Stabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
S/F | 0.1508 | likely_benign | 0.1424 | benign | -0.778 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.515953492 | None | None | N |
S/G | 0.1604 | likely_benign | 0.1518 | benign | -0.651 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
S/H | 0.3453 | ambiguous | 0.3601 | ambiguous | -0.929 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
S/I | 0.1473 | likely_benign | 0.1458 | benign | 0.049 | Stabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
S/K | 0.6469 | likely_pathogenic | 0.6787 | pathogenic | -0.128 | Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | N |
S/L | 0.1031 | likely_benign | 0.1017 | benign | 0.049 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
S/M | 0.2409 | likely_benign | 0.2453 | benign | -0.096 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
S/N | 0.2722 | likely_benign | 0.2439 | benign | -0.223 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
S/P | 0.9414 | likely_pathogenic | 0.9175 | pathogenic | -0.077 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.533639673 | None | None | N |
S/Q | 0.498 | ambiguous | 0.5253 | ambiguous | -0.229 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
S/R | 0.5026 | ambiguous | 0.5205 | ambiguous | -0.124 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
S/T | 0.0859 | likely_benign | 0.0892 | benign | -0.252 | Destabilizing | 0.999 | D | 0.556 | neutral | N | 0.487681019 | None | None | N |
S/V | 0.1436 | likely_benign | 0.1457 | benign | -0.077 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
S/W | 0.3764 | ambiguous | 0.3603 | ambiguous | -0.834 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
S/Y | 0.1816 | likely_benign | 0.1702 | benign | -0.475 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.492569318 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.