Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8085 | 24478;24479;24480 | chr2:178718947;178718946;178718945 | chr2:179583674;179583673;179583672 |
N2AB | 7768 | 23527;23528;23529 | chr2:178718947;178718946;178718945 | chr2:179583674;179583673;179583672 |
N2A | 6841 | 20746;20747;20748 | chr2:178718947;178718946;178718945 | chr2:179583674;179583673;179583672 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1553904192 | None | 0.324 | N | 0.341 | 0.23 | 0.342865806769 | gnomAD-4.0.0 | 1.60225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87573E-06 | 0 | 0 |
D/V | None | None | 0.324 | N | 0.442 | 0.396 | 0.601175442443 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0928 | likely_benign | 0.0902 | benign | -0.11 | Destabilizing | 0.006 | N | 0.181 | neutral | N | 0.507622382 | None | None | N |
D/C | 0.4598 | ambiguous | 0.473 | ambiguous | 0.003 | Stabilizing | 0.981 | D | 0.381 | neutral | None | None | None | None | N |
D/E | 0.087 | likely_benign | 0.0917 | benign | -0.223 | Destabilizing | 0.001 | N | 0.087 | neutral | N | 0.399454767 | None | None | N |
D/F | 0.3707 | ambiguous | 0.3774 | ambiguous | -0.019 | Destabilizing | 0.932 | D | 0.408 | neutral | None | None | None | None | N |
D/G | 0.1055 | likely_benign | 0.102 | benign | -0.282 | Destabilizing | 0.001 | N | 0.109 | neutral | N | 0.508315815 | None | None | N |
D/H | 0.1591 | likely_benign | 0.1695 | benign | 0.356 | Stabilizing | 0.773 | D | 0.401 | neutral | N | 0.484612236 | None | None | N |
D/I | 0.191 | likely_benign | 0.1948 | benign | 0.29 | Stabilizing | 0.818 | D | 0.432 | neutral | None | None | None | None | N |
D/K | 0.1477 | likely_benign | 0.1593 | benign | 0.491 | Stabilizing | 0.241 | N | 0.363 | neutral | None | None | None | None | N |
D/L | 0.2008 | likely_benign | 0.2073 | benign | 0.29 | Stabilizing | 0.388 | N | 0.441 | neutral | None | None | None | None | N |
D/M | 0.3895 | ambiguous | 0.4123 | ambiguous | 0.252 | Stabilizing | 0.981 | D | 0.388 | neutral | None | None | None | None | N |
D/N | 0.0805 | likely_benign | 0.0811 | benign | 0.119 | Stabilizing | 0.324 | N | 0.341 | neutral | N | 0.513721635 | None | None | N |
D/P | 0.346 | ambiguous | 0.3634 | ambiguous | 0.178 | Stabilizing | 0.818 | D | 0.422 | neutral | None | None | None | None | N |
D/Q | 0.148 | likely_benign | 0.1601 | benign | 0.163 | Stabilizing | 0.024 | N | 0.093 | neutral | None | None | None | None | N |
D/R | 0.1776 | likely_benign | 0.1875 | benign | 0.695 | Stabilizing | 0.388 | N | 0.406 | neutral | None | None | None | None | N |
D/S | 0.0824 | likely_benign | 0.0842 | benign | 0.039 | Stabilizing | 0.116 | N | 0.357 | neutral | None | None | None | None | N |
D/T | 0.1414 | likely_benign | 0.1481 | benign | 0.185 | Stabilizing | 0.388 | N | 0.357 | neutral | None | None | None | None | N |
D/V | 0.1168 | likely_benign | 0.1169 | benign | 0.178 | Stabilizing | 0.324 | N | 0.442 | neutral | N | 0.497098744 | None | None | N |
D/W | 0.7426 | likely_pathogenic | 0.7595 | pathogenic | 0.101 | Stabilizing | 0.981 | D | 0.447 | neutral | None | None | None | None | N |
D/Y | 0.1592 | likely_benign | 0.1606 | benign | 0.229 | Stabilizing | 0.912 | D | 0.422 | neutral | N | 0.492391507 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.