Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8091 | 24496;24497;24498 | chr2:178718929;178718928;178718927 | chr2:179583656;179583655;179583654 |
N2AB | 7774 | 23545;23546;23547 | chr2:178718929;178718928;178718927 | chr2:179583656;179583655;179583654 |
N2A | 6847 | 20764;20765;20766 | chr2:178718929;178718928;178718927 | chr2:179583656;179583655;179583654 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.767 | N | 0.415 | 0.199 | 0.132336055621 | gnomAD-4.0.0 | 2.05539E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70058E-06 | 0 | 0 |
P/L | rs1418085481 | None | 0.999 | N | 0.724 | 0.377 | 0.456647468687 | gnomAD-4.0.0 | 1.59558E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86475E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1652 | likely_benign | 0.1365 | benign | -1.348 | Destabilizing | 0.767 | D | 0.415 | neutral | N | 0.476503601 | None | None | I |
P/C | 0.8035 | likely_pathogenic | 0.7321 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/D | 0.8035 | likely_pathogenic | 0.7675 | pathogenic | -1.296 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
P/E | 0.4912 | ambiguous | 0.4265 | ambiguous | -1.328 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
P/F | 0.8531 | likely_pathogenic | 0.81 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
P/G | 0.6314 | likely_pathogenic | 0.5829 | pathogenic | -1.628 | Destabilizing | 0.997 | D | 0.649 | neutral | None | None | None | None | I |
P/H | 0.4724 | ambiguous | 0.4066 | ambiguous | -1.165 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.480201924 | None | None | I |
P/I | 0.5953 | likely_pathogenic | 0.5393 | ambiguous | -0.692 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
P/K | 0.5774 | likely_pathogenic | 0.5113 | ambiguous | -1.269 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
P/L | 0.2701 | likely_benign | 0.2213 | benign | -0.692 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | N | 0.497302948 | None | None | I |
P/M | 0.6407 | likely_pathogenic | 0.5719 | pathogenic | -0.474 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
P/N | 0.7028 | likely_pathogenic | 0.6467 | pathogenic | -0.992 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/Q | 0.3594 | ambiguous | 0.2915 | benign | -1.201 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
P/R | 0.3705 | ambiguous | 0.3183 | benign | -0.661 | Destabilizing | 0.999 | D | 0.778 | deleterious | N | 0.45268992 | None | None | I |
P/S | 0.281 | likely_benign | 0.2353 | benign | -1.433 | Destabilizing | 0.998 | D | 0.675 | prob.neutral | N | 0.479930696 | None | None | I |
P/T | 0.2309 | likely_benign | 0.1919 | benign | -1.364 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | N | 0.478410543 | None | None | I |
P/V | 0.417 | ambiguous | 0.3694 | ambiguous | -0.876 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | I |
P/W | 0.8801 | likely_pathogenic | 0.8464 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
P/Y | 0.7948 | likely_pathogenic | 0.7383 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.