Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8093 | 24502;24503;24504 | chr2:178718923;178718922;178718921 | chr2:179583650;179583649;179583648 |
N2AB | 7776 | 23551;23552;23553 | chr2:178718923;178718922;178718921 | chr2:179583650;179583649;179583648 |
N2A | 6849 | 20770;20771;20772 | chr2:178718923;178718922;178718921 | chr2:179583650;179583649;179583648 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | rs773993718 | 0.088 | None | N | 0.164 | 0.084 | 0.136095386433 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.98E-06 | 0 |
M/T | rs773993718 | 0.088 | None | N | 0.164 | 0.084 | 0.136095386433 | gnomAD-4.0.0 | 1.59434E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41663E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.1692 | likely_benign | 0.1815 | benign | -0.827 | Destabilizing | None | N | 0.168 | neutral | None | None | None | None | I |
M/C | 0.623 | likely_pathogenic | 0.6491 | pathogenic | -0.822 | Destabilizing | 0.132 | N | 0.267 | neutral | None | None | None | None | I |
M/D | 0.3791 | ambiguous | 0.4367 | ambiguous | 0.388 | Stabilizing | 0.009 | N | 0.346 | neutral | None | None | None | None | I |
M/E | 0.1756 | likely_benign | 0.1927 | benign | 0.386 | Stabilizing | 0.002 | N | 0.295 | neutral | None | None | None | None | I |
M/F | 0.2349 | likely_benign | 0.2377 | benign | -0.107 | Destabilizing | 0.009 | N | 0.194 | neutral | None | None | None | None | I |
M/G | 0.3176 | likely_benign | 0.3359 | benign | -1.087 | Destabilizing | None | N | 0.182 | neutral | None | None | None | None | I |
M/H | 0.2356 | likely_benign | 0.272 | benign | -0.182 | Destabilizing | 0.316 | N | 0.343 | neutral | None | None | None | None | I |
M/I | 0.2267 | likely_benign | 0.227 | benign | -0.206 | Destabilizing | None | N | 0.133 | neutral | N | 0.475447596 | None | None | I |
M/K | 0.0844 | likely_benign | 0.0947 | benign | 0.189 | Stabilizing | None | N | 0.195 | neutral | N | 0.411761476 | None | None | I |
M/L | 0.1173 | likely_benign | 0.1176 | benign | -0.206 | Destabilizing | None | N | 0.174 | neutral | N | 0.494129357 | None | None | I |
M/N | 0.1825 | likely_benign | 0.2049 | benign | 0.264 | Stabilizing | 0.009 | N | 0.301 | neutral | None | None | None | None | I |
M/P | 0.831 | likely_pathogenic | 0.8478 | pathogenic | -0.382 | Destabilizing | 0.018 | N | 0.302 | neutral | None | None | None | None | I |
M/Q | 0.1107 | likely_benign | 0.1219 | benign | 0.19 | Stabilizing | 0.009 | N | 0.183 | neutral | None | None | None | None | I |
M/R | 0.0928 | likely_benign | 0.1054 | benign | 0.606 | Stabilizing | 0.003 | N | 0.295 | neutral | N | 0.441180306 | None | None | I |
M/S | 0.1378 | likely_benign | 0.1564 | benign | -0.327 | Destabilizing | None | N | 0.165 | neutral | None | None | None | None | I |
M/T | 0.085 | likely_benign | 0.0967 | benign | -0.21 | Destabilizing | None | N | 0.164 | neutral | N | 0.398005532 | None | None | I |
M/V | 0.0869 | likely_benign | 0.0876 | benign | -0.382 | Destabilizing | None | N | 0.102 | neutral | N | 0.512715118 | None | None | I |
M/W | 0.4822 | ambiguous | 0.5257 | ambiguous | -0.081 | Destabilizing | 0.316 | N | 0.261 | neutral | None | None | None | None | I |
M/Y | 0.341 | ambiguous | 0.3878 | ambiguous | 0.013 | Stabilizing | 0.041 | N | 0.372 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.