Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8095 | 24508;24509;24510 | chr2:178718917;178718916;178718915 | chr2:179583644;179583643;179583642 |
N2AB | 7778 | 23557;23558;23559 | chr2:178718917;178718916;178718915 | chr2:179583644;179583643;179583642 |
N2A | 6851 | 20776;20777;20778 | chr2:178718917;178718916;178718915 | chr2:179583644;179583643;179583642 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs2077909849 | None | None | N | 0.185 | 0.066 | 0.117506650769 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs2077909849 | None | None | N | 0.185 | 0.066 | 0.117506650769 | gnomAD-4.0.0 | 6.5754E-06 | None | None | None | None | N | None | 0 | 6.55136E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2355 | likely_benign | 0.2323 | benign | -2.024 | Highly Destabilizing | 0.116 | N | 0.562 | neutral | None | None | None | None | N |
L/C | 0.379 | ambiguous | 0.3959 | ambiguous | -1.636 | Destabilizing | 0.944 | D | 0.697 | prob.neutral | None | None | None | None | N |
L/D | 0.8072 | likely_pathogenic | 0.8221 | pathogenic | -1.174 | Destabilizing | 0.69 | D | 0.753 | deleterious | None | None | None | None | N |
L/E | 0.4621 | ambiguous | 0.4938 | ambiguous | -1.012 | Destabilizing | 0.241 | N | 0.691 | prob.neutral | None | None | None | None | N |
L/F | 0.1411 | likely_benign | 0.1444 | benign | -1.148 | Destabilizing | 0.627 | D | 0.723 | prob.delet. | N | 0.491227912 | None | None | N |
L/G | 0.6138 | likely_pathogenic | 0.5944 | pathogenic | -2.481 | Highly Destabilizing | 0.563 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/H | 0.2519 | likely_benign | 0.2806 | benign | -1.509 | Destabilizing | 0.928 | D | 0.72 | prob.delet. | N | 0.507178799 | None | None | N |
L/I | 0.0599 | likely_benign | 0.0625 | benign | -0.758 | Destabilizing | 0.001 | N | 0.247 | neutral | N | 0.415959362 | None | None | N |
L/K | 0.3142 | likely_benign | 0.3408 | ambiguous | -1.436 | Destabilizing | 0.241 | N | 0.677 | prob.neutral | None | None | None | None | N |
L/M | 0.1025 | likely_benign | 0.1085 | benign | -0.882 | Destabilizing | 0.69 | D | 0.676 | prob.neutral | None | None | None | None | N |
L/N | 0.5157 | ambiguous | 0.5282 | ambiguous | -1.631 | Destabilizing | 0.818 | D | 0.755 | deleterious | None | None | None | None | N |
L/P | 0.8271 | likely_pathogenic | 0.835 | pathogenic | -1.155 | Destabilizing | 0.912 | D | 0.753 | deleterious | N | 0.514990206 | None | None | N |
L/Q | 0.2026 | likely_benign | 0.217 | benign | -1.518 | Destabilizing | 0.054 | N | 0.537 | neutral | None | None | None | None | N |
L/R | 0.211 | likely_benign | 0.2321 | benign | -1.138 | Destabilizing | 0.627 | D | 0.734 | prob.delet. | N | 0.460152793 | None | None | N |
L/S | 0.3435 | ambiguous | 0.3252 | benign | -2.427 | Highly Destabilizing | 0.388 | N | 0.666 | neutral | None | None | None | None | N |
L/T | 0.2076 | likely_benign | 0.2181 | benign | -2.102 | Highly Destabilizing | 0.388 | N | 0.639 | neutral | None | None | None | None | N |
L/V | 0.0528 | likely_benign | 0.055 | benign | -1.155 | Destabilizing | None | N | 0.185 | neutral | N | 0.328278875 | None | None | N |
L/W | 0.357 | ambiguous | 0.3923 | ambiguous | -1.23 | Destabilizing | 0.981 | D | 0.688 | prob.neutral | None | None | None | None | N |
L/Y | 0.3657 | ambiguous | 0.3981 | ambiguous | -1.013 | Destabilizing | 0.818 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.