Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8103 | 24532;24533;24534 | chr2:178718893;178718892;178718891 | chr2:179583620;179583619;179583618 |
N2AB | 7786 | 23581;23582;23583 | chr2:178718893;178718892;178718891 | chr2:179583620;179583619;179583618 |
N2A | 6859 | 20800;20801;20802 | chr2:178718893;178718892;178718891 | chr2:179583620;179583619;179583618 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | None | None | 1.0 | D | 0.829 | 0.663 | 0.542721108892 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7076 | likely_pathogenic | 0.77 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.571358551 | None | None | I |
G/C | 0.9538 | likely_pathogenic | 0.9614 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | D | 0.64906227 | None | None | I |
G/D | 0.9827 | likely_pathogenic | 0.9791 | pathogenic | -0.598 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.647851444 | None | None | I |
G/E | 0.9846 | likely_pathogenic | 0.9855 | pathogenic | -0.611 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/F | 0.9941 | likely_pathogenic | 0.994 | pathogenic | -0.663 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
G/H | 0.9969 | likely_pathogenic | 0.9967 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
G/I | 0.9843 | likely_pathogenic | 0.9879 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
G/K | 0.9963 | likely_pathogenic | 0.996 | pathogenic | -0.806 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/L | 0.9891 | likely_pathogenic | 0.9911 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
G/M | 0.9915 | likely_pathogenic | 0.993 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
G/N | 0.99 | likely_pathogenic | 0.9889 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
G/P | 0.9973 | likely_pathogenic | 0.998 | pathogenic | -0.07 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/Q | 0.9931 | likely_pathogenic | 0.9936 | pathogenic | -0.68 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/R | 0.9908 | likely_pathogenic | 0.9905 | pathogenic | -0.62 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.648658661 | None | None | I |
G/S | 0.8181 | likely_pathogenic | 0.8219 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.558205528 | None | None | I |
G/T | 0.9643 | likely_pathogenic | 0.9689 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
G/V | 0.9601 | likely_pathogenic | 0.9703 | pathogenic | -0.07 | Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.623120549 | None | None | I |
G/W | 0.9887 | likely_pathogenic | 0.987 | pathogenic | -1.045 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
G/Y | 0.9928 | likely_pathogenic | 0.9925 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.