Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8104 | 24535;24536;24537 | chr2:178718890;178718889;178718888 | chr2:179583617;179583616;179583615 |
N2AB | 7787 | 23584;23585;23586 | chr2:178718890;178718889;178718888 | chr2:179583617;179583616;179583615 |
N2A | 6860 | 20803;20804;20805 | chr2:178718890;178718889;178718888 | chr2:179583617;179583616;179583615 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.782 | N | 0.553 | 0.251 | 0.42538462244 | gnomAD-4.0.0 | 1.59177E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1491 | likely_benign | 0.1513 | benign | -0.454 | Destabilizing | 0.174 | N | 0.452 | neutral | N | 0.492365054 | None | None | I |
T/C | 0.6702 | likely_pathogenic | 0.6757 | pathogenic | -0.458 | Destabilizing | 0.973 | D | 0.597 | neutral | None | None | None | None | I |
T/D | 0.4958 | ambiguous | 0.4785 | ambiguous | 0.082 | Stabilizing | 0.575 | D | 0.598 | neutral | None | None | None | None | I |
T/E | 0.4498 | ambiguous | 0.4274 | ambiguous | 0.064 | Stabilizing | 0.404 | N | 0.595 | neutral | None | None | None | None | I |
T/F | 0.3405 | ambiguous | 0.3194 | benign | -0.796 | Destabilizing | 0.906 | D | 0.698 | prob.neutral | None | None | None | None | I |
T/G | 0.4177 | ambiguous | 0.3879 | ambiguous | -0.638 | Destabilizing | 0.404 | N | 0.632 | neutral | None | None | None | None | I |
T/H | 0.3505 | ambiguous | 0.341 | ambiguous | -0.723 | Destabilizing | 0.973 | D | 0.703 | prob.neutral | None | None | None | None | I |
T/I | 0.3358 | likely_benign | 0.3103 | benign | -0.071 | Destabilizing | 0.782 | D | 0.553 | neutral | N | 0.489126278 | None | None | I |
T/K | 0.3079 | likely_benign | 0.2673 | benign | -0.42 | Destabilizing | 0.404 | N | 0.597 | neutral | None | None | None | None | I |
T/L | 0.1911 | likely_benign | 0.1736 | benign | -0.071 | Destabilizing | 0.575 | D | 0.579 | neutral | None | None | None | None | I |
T/M | 0.129 | likely_benign | 0.1249 | benign | -0.235 | Destabilizing | 0.991 | D | 0.585 | neutral | None | None | None | None | I |
T/N | 0.1551 | likely_benign | 0.1486 | benign | -0.363 | Destabilizing | 0.338 | N | 0.537 | neutral | N | 0.493423721 | None | None | I |
T/P | 0.3873 | ambiguous | 0.367 | ambiguous | -0.169 | Destabilizing | 0.782 | D | 0.548 | neutral | N | 0.517523655 | None | None | I |
T/Q | 0.3237 | likely_benign | 0.295 | benign | -0.457 | Destabilizing | 0.826 | D | 0.582 | neutral | None | None | None | None | I |
T/R | 0.2612 | likely_benign | 0.2296 | benign | -0.155 | Destabilizing | 0.826 | D | 0.572 | neutral | None | None | None | None | I |
T/S | 0.1119 | likely_benign | 0.1094 | benign | -0.577 | Destabilizing | 0.001 | N | 0.219 | neutral | N | 0.444765769 | None | None | I |
T/V | 0.2857 | likely_benign | 0.2641 | benign | -0.169 | Destabilizing | 0.575 | D | 0.503 | neutral | None | None | None | None | I |
T/W | 0.7119 | likely_pathogenic | 0.691 | pathogenic | -0.856 | Destabilizing | 0.991 | D | 0.759 | deleterious | None | None | None | None | I |
T/Y | 0.3642 | ambiguous | 0.3656 | ambiguous | -0.55 | Destabilizing | 0.906 | D | 0.706 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.