Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8106 | 24541;24542;24543 | chr2:178718884;178718883;178718882 | chr2:179583611;179583610;179583609 |
N2AB | 7789 | 23590;23591;23592 | chr2:178718884;178718883;178718882 | chr2:179583611;179583610;179583609 |
N2A | 6862 | 20809;20810;20811 | chr2:178718884;178718883;178718882 | chr2:179583611;179583610;179583609 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | N | 0.689 | 0.472 | 0.688445511621 | gnomAD-4.0.0 | 6.84299E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52232E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2035 | likely_benign | 0.2158 | benign | -0.684 | Destabilizing | 1.0 | D | 0.661 | neutral | N | 0.497200446 | None | None | I |
P/C | 0.7976 | likely_pathogenic | 0.8096 | pathogenic | -0.571 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
P/D | 0.6398 | likely_pathogenic | 0.6485 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
P/E | 0.5146 | ambiguous | 0.5301 | ambiguous | -0.707 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | I |
P/F | 0.7772 | likely_pathogenic | 0.7789 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | I |
P/G | 0.5794 | likely_pathogenic | 0.5807 | pathogenic | -0.858 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
P/H | 0.4245 | ambiguous | 0.4492 | ambiguous | -0.39 | Destabilizing | 1.0 | D | 0.639 | neutral | D | 0.528435433 | None | None | I |
P/I | 0.6011 | likely_pathogenic | 0.6172 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
P/K | 0.5768 | likely_pathogenic | 0.6035 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
P/L | 0.3061 | likely_benign | 0.3057 | benign | -0.351 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.507101947 | None | None | I |
P/M | 0.6203 | likely_pathogenic | 0.6329 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
P/N | 0.5548 | ambiguous | 0.5655 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
P/Q | 0.386 | ambiguous | 0.4025 | ambiguous | -0.56 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
P/R | 0.3735 | ambiguous | 0.3943 | ambiguous | -0.116 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.507101947 | None | None | I |
P/S | 0.2912 | likely_benign | 0.3 | benign | -0.674 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.511772755 | None | None | I |
P/T | 0.2592 | likely_benign | 0.2734 | benign | -0.655 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.497098314 | None | None | I |
P/V | 0.4363 | ambiguous | 0.4517 | ambiguous | -0.428 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/W | 0.8898 | likely_pathogenic | 0.8871 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
P/Y | 0.7096 | likely_pathogenic | 0.7269 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.