Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8117 | 24574;24575;24576 | chr2:178718851;178718850;178718849 | chr2:179583578;179583577;179583576 |
N2AB | 7800 | 23623;23624;23625 | chr2:178718851;178718850;178718849 | chr2:179583578;179583577;179583576 |
N2A | 6873 | 20842;20843;20844 | chr2:178718851;178718850;178718849 | chr2:179583578;179583577;179583576 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.505 | 0.39 | 0.269111216191 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2387 | likely_benign | 0.2627 | benign | -0.565 | Destabilizing | 0.999 | D | 0.673 | neutral | N | 0.493721407 | None | None | N |
E/C | 0.9193 | likely_pathogenic | 0.9259 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/D | 0.4137 | ambiguous | 0.4596 | ambiguous | -0.751 | Destabilizing | 0.999 | D | 0.505 | neutral | N | 0.494099801 | None | None | N |
E/F | 0.8508 | likely_pathogenic | 0.8667 | pathogenic | 0.173 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/G | 0.3968 | ambiguous | 0.4363 | ambiguous | -0.9 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.519031365 | None | None | N |
E/H | 0.7425 | likely_pathogenic | 0.7587 | pathogenic | 0.271 | Stabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
E/I | 0.3554 | ambiguous | 0.3797 | ambiguous | 0.343 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/K | 0.2895 | likely_benign | 0.3065 | benign | -0.261 | Destabilizing | 0.999 | D | 0.652 | neutral | N | 0.490719213 | None | None | N |
E/L | 0.4463 | ambiguous | 0.4622 | ambiguous | 0.343 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/M | 0.485 | ambiguous | 0.4983 | ambiguous | 0.432 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
E/N | 0.5654 | likely_pathogenic | 0.601 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/P | 0.5101 | ambiguous | 0.5347 | ambiguous | 0.062 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/Q | 0.1979 | likely_benign | 0.1995 | benign | -0.748 | Destabilizing | 1.0 | D | 0.608 | neutral | N | 0.489847066 | None | None | N |
E/R | 0.4779 | ambiguous | 0.5033 | ambiguous | 0.177 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/S | 0.4363 | ambiguous | 0.4695 | ambiguous | -1.126 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
E/T | 0.4272 | ambiguous | 0.4524 | ambiguous | -0.839 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/V | 0.2282 | likely_benign | 0.2409 | benign | 0.062 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.493912444 | None | None | N |
E/W | 0.9592 | likely_pathogenic | 0.9632 | pathogenic | 0.463 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/Y | 0.7992 | likely_pathogenic | 0.8219 | pathogenic | 0.442 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.