Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8118 | 24577;24578;24579 | chr2:178718848;178718847;178718846 | chr2:179583575;179583574;179583573 |
N2AB | 7801 | 23626;23627;23628 | chr2:178718848;178718847;178718846 | chr2:179583575;179583574;179583573 |
N2A | 6874 | 20845;20846;20847 | chr2:178718848;178718847;178718846 | chr2:179583575;179583574;179583573 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs780410071 | -1.247 | 0.99 | D | 0.835 | 0.598 | 0.902064092376 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.56E-05 | 0 |
L/P | rs780410071 | -1.247 | 0.99 | D | 0.835 | 0.598 | 0.902064092376 | gnomAD-4.0.0 | 8.21065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07938E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5126 | ambiguous | 0.5569 | ambiguous | -2.166 | Highly Destabilizing | 0.754 | D | 0.509 | neutral | None | None | None | None | N |
L/C | 0.7845 | likely_pathogenic | 0.8019 | pathogenic | -1.228 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
L/D | 0.9604 | likely_pathogenic | 0.9684 | pathogenic | -2.532 | Highly Destabilizing | 0.978 | D | 0.835 | deleterious | None | None | None | None | N |
L/E | 0.771 | likely_pathogenic | 0.7975 | pathogenic | -2.293 | Highly Destabilizing | 0.978 | D | 0.819 | deleterious | None | None | None | None | N |
L/F | 0.2758 | likely_benign | 0.2843 | benign | -1.325 | Destabilizing | 0.956 | D | 0.668 | neutral | None | None | None | None | N |
L/G | 0.8801 | likely_pathogenic | 0.9035 | pathogenic | -2.681 | Highly Destabilizing | 0.978 | D | 0.813 | deleterious | None | None | None | None | N |
L/H | 0.6323 | likely_pathogenic | 0.6634 | pathogenic | -2.057 | Highly Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
L/I | 0.0864 | likely_benign | 0.0854 | benign | -0.676 | Destabilizing | 0.16 | N | 0.341 | neutral | None | None | None | None | N |
L/K | 0.6188 | likely_pathogenic | 0.6457 | pathogenic | -1.609 | Destabilizing | 0.956 | D | 0.781 | deleterious | None | None | None | None | N |
L/M | 0.1476 | likely_benign | 0.1462 | benign | -0.534 | Destabilizing | 0.247 | N | 0.425 | neutral | N | 0.502340051 | None | None | N |
L/N | 0.8554 | likely_pathogenic | 0.8728 | pathogenic | -2.032 | Highly Destabilizing | 0.978 | D | 0.837 | deleterious | None | None | None | None | N |
L/P | 0.9199 | likely_pathogenic | 0.9369 | pathogenic | -1.155 | Destabilizing | 0.99 | D | 0.835 | deleterious | D | 0.544170875 | None | None | N |
L/Q | 0.491 | ambiguous | 0.5235 | ambiguous | -1.88 | Destabilizing | 0.971 | D | 0.815 | deleterious | D | 0.55100773 | None | None | N |
L/R | 0.4732 | ambiguous | 0.5091 | ambiguous | -1.405 | Destabilizing | 0.942 | D | 0.809 | deleterious | D | 0.55075424 | None | None | N |
L/S | 0.791 | likely_pathogenic | 0.8295 | pathogenic | -2.661 | Highly Destabilizing | 0.956 | D | 0.757 | deleterious | None | None | None | None | N |
L/T | 0.5113 | ambiguous | 0.5707 | pathogenic | -2.274 | Highly Destabilizing | 0.956 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/V | 0.1068 | likely_benign | 0.1097 | benign | -1.155 | Destabilizing | 0.489 | N | 0.471 | neutral | N | 0.496980772 | None | None | N |
L/W | 0.4812 | ambiguous | 0.5079 | ambiguous | -1.695 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
L/Y | 0.6138 | likely_pathogenic | 0.6285 | pathogenic | -1.335 | Destabilizing | 0.978 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.