Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8122 | 24589;24590;24591 | chr2:178718836;178718835;178718834 | chr2:179583563;179583562;179583561 |
N2AB | 7805 | 23638;23639;23640 | chr2:178718836;178718835;178718834 | chr2:179583563;179583562;179583561 |
N2A | 6878 | 20857;20858;20859 | chr2:178718836;178718835;178718834 | chr2:179583563;179583562;179583561 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | None | N | 0.137 | 0.143 | 0.159798565429 | gnomAD-4.0.0 | 1.59132E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
E/V | rs757736721 | 0.359 | 0.081 | N | 0.215 | 0.144 | 0.256793551483 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
E/V | rs757736721 | 0.359 | 0.081 | N | 0.215 | 0.144 | 0.256793551483 | gnomAD-4.0.0 | 4.77386E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.5751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1051 | likely_benign | 0.0995 | benign | -0.014 | Destabilizing | 0.019 | N | 0.243 | neutral | N | 0.43760407 | None | None | N |
E/C | 0.6441 | likely_pathogenic | 0.6275 | pathogenic | -0.388 | Destabilizing | 0.958 | D | 0.195 | neutral | None | None | None | None | N |
E/D | 0.0765 | likely_benign | 0.0694 | benign | -0.545 | Destabilizing | None | N | 0.147 | neutral | N | 0.395005299 | None | None | N |
E/F | 0.449 | ambiguous | 0.4219 | ambiguous | -0.081 | Destabilizing | 0.859 | D | 0.245 | neutral | None | None | None | None | N |
E/G | 0.0899 | likely_benign | 0.0884 | benign | -0.085 | Destabilizing | 0.042 | N | 0.243 | neutral | N | 0.441084306 | None | None | N |
E/H | 0.2379 | likely_benign | 0.2248 | benign | 0.559 | Stabilizing | 0.667 | D | 0.221 | neutral | None | None | None | None | N |
E/I | 0.2073 | likely_benign | 0.1911 | benign | 0.116 | Stabilizing | 0.22 | N | 0.308 | neutral | None | None | None | None | N |
E/K | 0.0764 | likely_benign | 0.0729 | benign | 0.228 | Stabilizing | None | N | 0.137 | neutral | N | 0.44955186 | None | None | N |
E/L | 0.2366 | likely_benign | 0.2252 | benign | 0.116 | Stabilizing | 0.104 | N | 0.211 | neutral | None | None | None | None | N |
E/M | 0.2983 | likely_benign | 0.2807 | benign | -0.14 | Destabilizing | 0.859 | D | 0.225 | neutral | None | None | None | None | N |
E/N | 0.1297 | likely_benign | 0.1165 | benign | -0.034 | Destabilizing | 0.055 | N | 0.216 | neutral | None | None | None | None | N |
E/P | 0.2067 | likely_benign | 0.1964 | benign | 0.087 | Stabilizing | None | N | 0.13 | neutral | None | None | None | None | N |
E/Q | 0.098 | likely_benign | 0.0959 | benign | -0.024 | Destabilizing | 0.008 | N | 0.193 | neutral | N | 0.452669523 | None | None | N |
E/R | 0.1201 | likely_benign | 0.1187 | benign | 0.421 | Stabilizing | 0.124 | N | 0.237 | neutral | None | None | None | None | N |
E/S | 0.1065 | likely_benign | 0.0978 | benign | -0.127 | Destabilizing | 0.002 | N | 0.126 | neutral | None | None | None | None | N |
E/T | 0.1369 | likely_benign | 0.1282 | benign | -0.052 | Destabilizing | 0.002 | N | 0.129 | neutral | None | None | None | None | N |
E/V | 0.1391 | likely_benign | 0.1326 | benign | 0.087 | Stabilizing | 0.081 | N | 0.215 | neutral | N | 0.469793847 | None | None | N |
E/W | 0.6434 | likely_pathogenic | 0.6256 | pathogenic | -0.071 | Destabilizing | 0.958 | D | 0.202 | neutral | None | None | None | None | N |
E/Y | 0.3284 | likely_benign | 0.3137 | benign | 0.113 | Stabilizing | 0.859 | D | 0.276 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.