Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8126 | 24601;24602;24603 | chr2:178718824;178718823;178718822 | chr2:179583551;179583550;179583549 |
N2AB | 7809 | 23650;23651;23652 | chr2:178718824;178718823;178718822 | chr2:179583551;179583550;179583549 |
N2A | 6882 | 20869;20870;20871 | chr2:178718824;178718823;178718822 | chr2:179583551;179583550;179583549 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs764456853 | -1.049 | 0.899 | N | 0.293 | 0.183 | 0.486993258117 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 1.65782E-04 |
I/V | rs764456853 | -1.049 | 0.899 | N | 0.293 | 0.183 | 0.486993258117 | gnomAD-4.0.0 | 1.16315E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43916E-05 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5537 | ambiguous | 0.5739 | pathogenic | -2.119 | Highly Destabilizing | 0.993 | D | 0.537 | neutral | None | None | None | None | I |
I/C | 0.7764 | likely_pathogenic | 0.8033 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | I |
I/D | 0.8503 | likely_pathogenic | 0.8692 | pathogenic | -1.759 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | I |
I/E | 0.7564 | likely_pathogenic | 0.7802 | pathogenic | -1.683 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
I/F | 0.1404 | likely_benign | 0.1886 | benign | -1.448 | Destabilizing | 0.135 | N | 0.201 | neutral | N | 0.488672205 | None | None | I |
I/G | 0.8173 | likely_pathogenic | 0.8367 | pathogenic | -2.537 | Highly Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | I |
I/H | 0.6103 | likely_pathogenic | 0.6627 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
I/K | 0.5659 | likely_pathogenic | 0.6084 | pathogenic | -1.383 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
I/L | 0.1392 | likely_benign | 0.1522 | benign | -0.989 | Destabilizing | 0.817 | D | 0.267 | neutral | N | 0.488530393 | None | None | I |
I/M | 0.1294 | likely_benign | 0.1462 | benign | -0.779 | Destabilizing | 0.999 | D | 0.521 | neutral | N | 0.498027048 | None | None | I |
I/N | 0.4814 | ambiguous | 0.5094 | ambiguous | -1.287 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | D | 0.529453072 | None | None | I |
I/P | 0.8965 | likely_pathogenic | 0.9184 | pathogenic | -1.339 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | I |
I/Q | 0.6053 | likely_pathogenic | 0.6449 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | I |
I/R | 0.4347 | ambiguous | 0.488 | ambiguous | -0.909 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | I |
I/S | 0.4791 | ambiguous | 0.4996 | ambiguous | -1.98 | Destabilizing | 0.999 | D | 0.63 | neutral | N | 0.512398774 | None | None | I |
I/T | 0.4157 | ambiguous | 0.4149 | ambiguous | -1.777 | Destabilizing | 0.997 | D | 0.568 | neutral | N | 0.493952124 | None | None | I |
I/V | 0.0923 | likely_benign | 0.0943 | benign | -1.339 | Destabilizing | 0.899 | D | 0.293 | neutral | N | 0.493055574 | None | None | I |
I/W | 0.7602 | likely_pathogenic | 0.8193 | pathogenic | -1.627 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
I/Y | 0.4715 | ambiguous | 0.5343 | ambiguous | -1.382 | Destabilizing | 0.971 | D | 0.573 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.