Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8128 | 24607;24608;24609 | chr2:178718818;178718817;178718816 | chr2:179583545;179583544;179583543 |
N2AB | 7811 | 23656;23657;23658 | chr2:178718818;178718817;178718816 | chr2:179583545;179583544;179583543 |
N2A | 6884 | 20875;20876;20877 | chr2:178718818;178718817;178718816 | chr2:179583545;179583544;179583543 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.001 | N | 0.33 | 0.064 | 0.247322355667 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85837E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2109 | likely_benign | 0.2007 | benign | -0.934 | Destabilizing | 0.241 | N | 0.548 | neutral | None | None | None | None | I |
L/C | 0.5415 | ambiguous | 0.5237 | ambiguous | -0.803 | Destabilizing | 0.944 | D | 0.611 | neutral | None | None | None | None | I |
L/D | 0.693 | likely_pathogenic | 0.6786 | pathogenic | -0.01 | Destabilizing | 0.818 | D | 0.685 | prob.neutral | None | None | None | None | I |
L/E | 0.303 | likely_benign | 0.2968 | benign | -0.051 | Destabilizing | 0.69 | D | 0.676 | prob.neutral | None | None | None | None | I |
L/F | 0.1191 | likely_benign | 0.1136 | benign | -0.694 | Destabilizing | 0.005 | N | 0.291 | neutral | None | None | None | None | I |
L/G | 0.5155 | ambiguous | 0.4973 | ambiguous | -1.177 | Destabilizing | 0.818 | D | 0.666 | neutral | None | None | None | None | I |
L/H | 0.2004 | likely_benign | 0.2053 | benign | -0.521 | Destabilizing | 0.981 | D | 0.658 | neutral | None | None | None | None | I |
L/I | 0.0922 | likely_benign | 0.088 | benign | -0.386 | Destabilizing | 0.002 | N | 0.294 | neutral | None | None | None | None | I |
L/K | 0.235 | likely_benign | 0.2303 | benign | -0.509 | Destabilizing | 0.019 | N | 0.459 | neutral | None | None | None | None | I |
L/M | 0.1015 | likely_benign | 0.0971 | benign | -0.422 | Destabilizing | 0.627 | D | 0.611 | neutral | N | 0.512533224 | None | None | I |
L/N | 0.4395 | ambiguous | 0.4234 | ambiguous | -0.32 | Destabilizing | 0.818 | D | 0.683 | prob.neutral | None | None | None | None | I |
L/P | 0.5412 | ambiguous | 0.5593 | ambiguous | -0.534 | Destabilizing | 0.912 | D | 0.685 | prob.neutral | N | 0.493036617 | None | None | I |
L/Q | 0.1319 | likely_benign | 0.1361 | benign | -0.48 | Destabilizing | 0.627 | D | 0.692 | prob.neutral | D | 0.533846191 | None | None | I |
L/R | 0.1568 | likely_benign | 0.159 | benign | -0.068 | Destabilizing | 0.457 | N | 0.695 | prob.neutral | N | 0.495390021 | None | None | I |
L/S | 0.2224 | likely_benign | 0.2157 | benign | -0.918 | Destabilizing | 0.69 | D | 0.678 | prob.neutral | None | None | None | None | I |
L/T | 0.1723 | likely_benign | 0.1628 | benign | -0.84 | Destabilizing | 0.388 | N | 0.614 | neutral | None | None | None | None | I |
L/V | 0.0843 | likely_benign | 0.0826 | benign | -0.534 | Destabilizing | 0.001 | N | 0.33 | neutral | N | 0.505792798 | None | None | I |
L/W | 0.2139 | likely_benign | 0.2112 | benign | -0.724 | Destabilizing | 0.01 | N | 0.551 | neutral | None | None | None | None | I |
L/Y | 0.3643 | ambiguous | 0.3505 | ambiguous | -0.466 | Destabilizing | 0.527 | D | 0.638 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.