Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8135 | 24628;24629;24630 | chr2:178718797;178718796;178718795 | chr2:179583524;179583523;179583522 |
N2AB | 7818 | 23677;23678;23679 | chr2:178718797;178718796;178718795 | chr2:179583524;179583523;179583522 |
N2A | 6891 | 20896;20897;20898 | chr2:178718797;178718796;178718795 | chr2:179583524;179583523;179583522 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs762631646 | -0.821 | 0.825 | D | 0.589 | 0.405 | 0.557792573389 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/M | rs762631646 | -0.821 | 0.825 | D | 0.589 | 0.405 | 0.557792573389 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
L/R | rs2077892519 | None | 0.994 | D | 0.901 | 0.849 | 0.895273315748 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
L/R | rs2077892519 | None | 0.994 | D | 0.901 | 0.849 | 0.895273315748 | gnomAD-4.0.0 | 5.12441E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.35992E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8273 | likely_pathogenic | 0.8661 | pathogenic | -2.419 | Highly Destabilizing | 0.968 | D | 0.745 | deleterious | None | None | None | None | N |
L/C | 0.9042 | likely_pathogenic | 0.9102 | pathogenic | -1.719 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -3.122 | Highly Destabilizing | 0.998 | D | 0.926 | deleterious | None | None | None | None | N |
L/E | 0.9912 | likely_pathogenic | 0.9911 | pathogenic | -2.788 | Highly Destabilizing | 0.995 | D | 0.903 | deleterious | None | None | None | None | N |
L/F | 0.6229 | likely_pathogenic | 0.6859 | pathogenic | -1.458 | Destabilizing | 0.991 | D | 0.778 | deleterious | None | None | None | None | N |
L/G | 0.968 | likely_pathogenic | 0.9726 | pathogenic | -3.046 | Highly Destabilizing | 0.995 | D | 0.899 | deleterious | None | None | None | None | N |
L/H | 0.9891 | likely_pathogenic | 0.9889 | pathogenic | -2.915 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/I | 0.2873 | likely_benign | 0.3457 | ambiguous | -0.532 | Destabilizing | 0.938 | D | 0.647 | neutral | None | None | None | None | N |
L/K | 0.9867 | likely_pathogenic | 0.9848 | pathogenic | -1.694 | Destabilizing | 0.991 | D | 0.899 | deleterious | None | None | None | None | N |
L/M | 0.2206 | likely_benign | 0.2796 | benign | -0.801 | Destabilizing | 0.825 | D | 0.589 | neutral | D | 0.539980593 | None | None | N |
L/N | 0.9948 | likely_pathogenic | 0.9945 | pathogenic | -2.43 | Highly Destabilizing | 0.995 | D | 0.924 | deleterious | None | None | None | None | N |
L/P | 0.9964 | likely_pathogenic | 0.9968 | pathogenic | -1.152 | Destabilizing | 0.998 | D | 0.922 | deleterious | D | 0.573595436 | None | None | N |
L/Q | 0.9709 | likely_pathogenic | 0.9726 | pathogenic | -2.036 | Highly Destabilizing | 0.994 | D | 0.921 | deleterious | D | 0.573595436 | None | None | N |
L/R | 0.9742 | likely_pathogenic | 0.9707 | pathogenic | -1.919 | Destabilizing | 0.994 | D | 0.901 | deleterious | D | 0.573595436 | None | None | N |
L/S | 0.9882 | likely_pathogenic | 0.9912 | pathogenic | -2.989 | Highly Destabilizing | 0.991 | D | 0.895 | deleterious | None | None | None | None | N |
L/T | 0.9444 | likely_pathogenic | 0.9559 | pathogenic | -2.478 | Highly Destabilizing | 0.991 | D | 0.805 | deleterious | None | None | None | None | N |
L/V | 0.3023 | likely_benign | 0.3634 | ambiguous | -1.152 | Destabilizing | 0.919 | D | 0.673 | neutral | D | 0.57182101 | None | None | N |
L/W | 0.9406 | likely_pathogenic | 0.9519 | pathogenic | -1.878 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/Y | 0.9558 | likely_pathogenic | 0.9619 | pathogenic | -1.619 | Destabilizing | 0.995 | D | 0.85 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.