Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8139 | 24640;24641;24642 | chr2:178718785;178718784;178718783 | chr2:179583512;179583511;179583510 |
N2AB | 7822 | 23689;23690;23691 | chr2:178718785;178718784;178718783 | chr2:179583512;179583511;179583510 |
N2A | 6895 | 20908;20909;20910 | chr2:178718785;178718784;178718783 | chr2:179583512;179583511;179583510 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1202623297 | 0.392 | 0.175 | N | 0.237 | 0.091 | 0.132336055621 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/Q | rs1202623297 | 0.392 | 0.175 | N | 0.237 | 0.091 | 0.132336055621 | gnomAD-4.0.0 | 3.42108E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49739E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1235 | likely_benign | 0.1244 | benign | -0.551 | Destabilizing | 0.001 | N | 0.126 | neutral | N | 0.488974253 | None | None | I |
E/C | 0.7126 | likely_pathogenic | 0.6902 | pathogenic | -0.027 | Destabilizing | 0.958 | D | 0.247 | neutral | None | None | None | None | I |
E/D | 0.0887 | likely_benign | 0.0826 | benign | -0.291 | Destabilizing | None | N | 0.088 | neutral | N | 0.422882547 | None | None | I |
E/F | 0.5734 | likely_pathogenic | 0.5906 | pathogenic | -0.45 | Destabilizing | 0.859 | D | 0.285 | neutral | None | None | None | None | I |
E/G | 0.1156 | likely_benign | 0.1146 | benign | -0.736 | Destabilizing | 0.042 | N | 0.221 | neutral | N | 0.494110714 | None | None | I |
E/H | 0.2447 | likely_benign | 0.2342 | benign | -0.277 | Destabilizing | 0.667 | D | 0.219 | neutral | None | None | None | None | I |
E/I | 0.3557 | ambiguous | 0.3891 | ambiguous | -0.097 | Destabilizing | 0.364 | N | 0.35 | neutral | None | None | None | None | I |
E/K | 0.1006 | likely_benign | 0.1053 | benign | 0.336 | Stabilizing | 0.001 | N | 0.129 | neutral | N | 0.464249167 | None | None | I |
E/L | 0.2962 | likely_benign | 0.3069 | benign | -0.097 | Destabilizing | 0.22 | N | 0.316 | neutral | None | None | None | None | I |
E/M | 0.3838 | ambiguous | 0.3961 | ambiguous | 0.109 | Stabilizing | 0.859 | D | 0.266 | neutral | None | None | None | None | I |
E/N | 0.1416 | likely_benign | 0.1371 | benign | -0.009 | Destabilizing | None | N | 0.101 | neutral | None | None | None | None | I |
E/P | 0.539 | ambiguous | 0.5419 | ambiguous | -0.23 | Destabilizing | 0.364 | N | 0.305 | neutral | None | None | None | None | I |
E/Q | 0.0989 | likely_benign | 0.0986 | benign | 0.022 | Stabilizing | 0.175 | N | 0.237 | neutral | N | 0.480528128 | None | None | I |
E/R | 0.141 | likely_benign | 0.1471 | benign | 0.469 | Stabilizing | 0.124 | N | 0.151 | neutral | None | None | None | None | I |
E/S | 0.1264 | likely_benign | 0.1265 | benign | -0.16 | Destabilizing | 0.005 | N | 0.134 | neutral | None | None | None | None | I |
E/T | 0.184 | likely_benign | 0.1927 | benign | -0.002 | Destabilizing | 0.055 | N | 0.252 | neutral | None | None | None | None | I |
E/V | 0.2244 | likely_benign | 0.2481 | benign | -0.23 | Destabilizing | 0.175 | N | 0.289 | neutral | N | 0.475215174 | None | None | I |
E/W | 0.7325 | likely_pathogenic | 0.7378 | pathogenic | -0.275 | Destabilizing | 0.958 | D | 0.261 | neutral | None | None | None | None | I |
E/Y | 0.4079 | ambiguous | 0.4177 | ambiguous | -0.207 | Destabilizing | 0.859 | D | 0.277 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.