Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8141 | 24646;24647;24648 | chr2:178718779;178718778;178718777 | chr2:179583506;179583505;179583504 |
N2AB | 7824 | 23695;23696;23697 | chr2:178718779;178718778;178718777 | chr2:179583506;179583505;179583504 |
N2A | 6897 | 20914;20915;20916 | chr2:178718779;178718778;178718777 | chr2:179583506;179583505;179583504 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs2154299738 | None | 0.001 | N | 0.197 | 0.132 | 0.0551355673512 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1145 | likely_benign | 0.1216 | benign | -0.495 | Destabilizing | None | N | 0.227 | neutral | None | None | None | None | I |
Q/C | 0.4599 | ambiguous | 0.4218 | ambiguous | 0.056 | Stabilizing | 0.132 | N | 0.373 | neutral | None | None | None | None | I |
Q/D | 0.1487 | likely_benign | 0.1488 | benign | -0.406 | Destabilizing | None | N | 0.126 | neutral | None | None | None | None | I |
Q/E | 0.0574 | likely_benign | 0.0575 | benign | -0.339 | Destabilizing | None | N | 0.133 | neutral | N | 0.434471418 | None | None | I |
Q/F | 0.4189 | ambiguous | 0.4323 | ambiguous | -0.271 | Destabilizing | 0.041 | N | 0.459 | neutral | None | None | None | None | I |
Q/G | 0.1113 | likely_benign | 0.1203 | benign | -0.824 | Destabilizing | None | N | 0.177 | neutral | None | None | None | None | I |
Q/H | 0.1229 | likely_benign | 0.1266 | benign | -0.747 | Destabilizing | 0.032 | N | 0.233 | neutral | N | 0.511492193 | None | None | I |
Q/I | 0.2289 | likely_benign | 0.2513 | benign | 0.329 | Stabilizing | 0.009 | N | 0.445 | neutral | None | None | None | None | I |
Q/K | 0.0614 | likely_benign | 0.0623 | benign | -0.325 | Destabilizing | None | N | 0.163 | neutral | N | 0.484110804 | None | None | I |
Q/L | 0.0894 | likely_benign | 0.0946 | benign | 0.329 | Stabilizing | 0.001 | N | 0.336 | neutral | N | 0.508086529 | None | None | I |
Q/M | 0.2346 | likely_benign | 0.2502 | benign | 0.713 | Stabilizing | 0.316 | N | 0.217 | neutral | None | None | None | None | I |
Q/N | 0.1357 | likely_benign | 0.1405 | benign | -0.828 | Destabilizing | None | N | 0.162 | neutral | None | None | None | None | I |
Q/P | 0.1344 | likely_benign | 0.1345 | benign | 0.086 | Stabilizing | 0.013 | N | 0.339 | neutral | N | 0.503142383 | None | None | I |
Q/R | 0.0733 | likely_benign | 0.0751 | benign | -0.265 | Destabilizing | 0.001 | N | 0.197 | neutral | N | 0.47139501 | None | None | I |
Q/S | 0.1093 | likely_benign | 0.1188 | benign | -0.868 | Destabilizing | 0.001 | N | 0.23 | neutral | None | None | None | None | I |
Q/T | 0.1128 | likely_benign | 0.1199 | benign | -0.614 | Destabilizing | 0.004 | N | 0.279 | neutral | None | None | None | None | I |
Q/V | 0.1562 | likely_benign | 0.1646 | benign | 0.086 | Stabilizing | 0.002 | N | 0.325 | neutral | None | None | None | None | I |
Q/W | 0.2949 | likely_benign | 0.3149 | benign | -0.181 | Destabilizing | 0.316 | N | 0.345 | neutral | None | None | None | None | I |
Q/Y | 0.2631 | likely_benign | 0.284 | benign | 0.041 | Stabilizing | 0.116 | N | 0.359 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.