Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8143 | 24652;24653;24654 | chr2:178718773;178718772;178718771 | chr2:179583500;179583499;179583498 |
N2AB | 7826 | 23701;23702;23703 | chr2:178718773;178718772;178718771 | chr2:179583500;179583499;179583498 |
N2A | 6899 | 20920;20921;20922 | chr2:178718773;178718772;178718771 | chr2:179583500;179583499;179583498 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs1274064527 | -0.016 | 0.007 | N | 0.193 | 0.028 | 0.104622674875 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/I | rs1274064527 | -0.016 | 0.007 | N | 0.193 | 0.028 | 0.104622674875 | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79898E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0693 | likely_benign | 0.0643 | benign | -0.446 | Destabilizing | None | N | 0.105 | neutral | None | None | None | None | I |
L/C | 0.3417 | ambiguous | 0.2989 | benign | -0.73 | Destabilizing | 0.245 | N | 0.249 | neutral | None | None | None | None | I |
L/D | 0.1982 | likely_benign | 0.1947 | benign | -0.204 | Destabilizing | 0.022 | N | 0.365 | neutral | None | None | None | None | I |
L/E | 0.1115 | likely_benign | 0.1141 | benign | -0.299 | Destabilizing | 0.009 | N | 0.321 | neutral | None | None | None | None | I |
L/F | 0.0785 | likely_benign | 0.0762 | benign | -0.578 | Destabilizing | None | N | 0.13 | neutral | N | 0.483875078 | None | None | I |
L/G | 0.1289 | likely_benign | 0.1276 | benign | -0.562 | Destabilizing | None | N | 0.127 | neutral | None | None | None | None | I |
L/H | 0.1069 | likely_benign | 0.0974 | benign | 0.089 | Stabilizing | 0.245 | N | 0.293 | neutral | None | None | None | None | I |
L/I | 0.0778 | likely_benign | 0.0747 | benign | -0.267 | Destabilizing | 0.007 | N | 0.193 | neutral | N | 0.483605719 | None | None | I |
L/K | 0.1092 | likely_benign | 0.1094 | benign | -0.319 | Destabilizing | 0.009 | N | 0.269 | neutral | None | None | None | None | I |
L/M | 0.0853 | likely_benign | 0.0819 | benign | -0.495 | Destabilizing | 0.004 | N | 0.163 | neutral | None | None | None | None | I |
L/N | 0.1162 | likely_benign | 0.1177 | benign | -0.174 | Destabilizing | 0.022 | N | 0.367 | neutral | None | None | None | None | I |
L/P | 0.1177 | likely_benign | 0.1203 | benign | -0.297 | Destabilizing | None | N | 0.183 | neutral | None | None | None | None | I |
L/Q | 0.0736 | likely_benign | 0.0711 | benign | -0.363 | Destabilizing | 0.044 | N | 0.359 | neutral | None | None | None | None | I |
L/R | 0.0895 | likely_benign | 0.0861 | benign | 0.172 | Stabilizing | 0.044 | N | 0.391 | neutral | None | None | None | None | I |
L/S | 0.065 | likely_benign | 0.0607 | benign | -0.569 | Destabilizing | None | N | 0.097 | neutral | N | 0.342514822 | None | None | I |
L/T | 0.0785 | likely_benign | 0.0762 | benign | -0.559 | Destabilizing | None | N | 0.137 | neutral | None | None | None | None | I |
L/V | 0.0722 | likely_benign | 0.0676 | benign | -0.297 | Destabilizing | 0.007 | N | 0.165 | neutral | N | 0.468617624 | None | None | I |
L/W | 0.1233 | likely_benign | 0.1194 | benign | -0.604 | Destabilizing | 0.788 | D | 0.28 | neutral | None | None | None | None | I |
L/Y | 0.1913 | likely_benign | 0.1746 | benign | -0.36 | Destabilizing | 0.022 | N | 0.319 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.