Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8144 | 24655;24656;24657 | chr2:178718770;178718769;178718768 | chr2:179583497;179583496;179583495 |
N2AB | 7827 | 23704;23705;23706 | chr2:178718770;178718769;178718768 | chr2:179583497;179583496;179583495 |
N2A | 6900 | 20923;20924;20925 | chr2:178718770;178718769;178718768 | chr2:179583497;179583496;179583495 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs16866465 | 1.123 | 0.003 | N | 0.449 | 0.227 | None | gnomAD-2.1.1 | 1.75062E-01 | None | None | None | None | N | None | 1.52217E-01 | 1.7377E-01 | None | 1.22413E-01 | 4.30462E-01 | None | 2.22538E-01 | None | 9.45222E-02 | 1.50195E-01 | 1.61608E-01 |
E/A | rs16866465 | 1.123 | 0.003 | N | 0.449 | 0.227 | None | gnomAD-3.1.2 | 1.64715E-01 | None | None | None | None | N | None | 1.5358E-01 | 1.70055E-01 | 4.71491E-01 | 1.25864E-01 | 4.33191E-01 | None | 9.86805E-02 | 1.20253E-01 | 1.54076E-01 | 2.23766E-01 | 1.65392E-01 |
E/A | rs16866465 | 1.123 | 0.003 | N | 0.449 | 0.227 | None | 1000 genomes | 2.38818E-01 | None | None | None | None | N | None | 1.732E-01 | 1.83E-01 | None | None | 4.375E-01 | 1.571E-01 | None | None | None | 2.464E-01 | None |
E/A | rs16866465 | 1.123 | 0.003 | N | 0.449 | 0.227 | None | gnomAD-4.0.0 | 1.63466E-01 | None | None | None | None | N | None | 1.53334E-01 | 1.73385E-01 | None | 1.23767E-01 | 4.42663E-01 | None | 9.43438E-02 | 1.92079E-01 | 1.52621E-01 | 2.20242E-01 | 1.70103E-01 |
E/D | rs756559627 | -1.13 | 0.003 | N | 0.431 | 0.034 | 0.0297737177859 | gnomAD-2.1.1 | 1.17847E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.39754E-04 | 1.56365E-04 | 2.80662E-04 |
E/D | rs756559627 | -1.13 | 0.003 | N | 0.431 | 0.034 | 0.0297737177859 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 1.88395E-04 | 0 | 5.88E-05 | 0 | 0 |
E/D | rs756559627 | -1.13 | 0.003 | N | 0.431 | 0.034 | 0.0297737177859 | gnomAD-4.0.0 | 1.14028E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.4679E-04 | 0 | 1.16127E-04 | 0 | 1.92111E-04 |
E/G | rs16866465 | 0.345 | 0.007 | N | 0.539 | 0.234 | 0.388812400583 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11408E-04 | None | 0 | None | 0 | 0 | 0 |
E/G | rs16866465 | 0.345 | 0.007 | N | 0.539 | 0.234 | 0.388812400583 | gnomAD-4.0.0 | 2.73688E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.55896E-05 | None | 0 | 0 | 0 | 0 | 1.65667E-05 |
E/K | rs761751961 | 1.065 | 0.003 | N | 0.449 | 0.16 | 0.204665344411 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs761751961 | 1.065 | 0.003 | N | 0.449 | 0.16 | 0.204665344411 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
E/K | rs761751961 | 1.065 | 0.003 | N | 0.449 | 0.16 | 0.204665344411 | gnomAD-4.0.0 | 5.12449E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.42483E-05 | None | 0 | 0 | 0 | 4.02026E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1376 | likely_benign | 0.1516 | benign | 0.09 | Stabilizing | 0.003 | N | 0.449 | neutral | N | 0.474896675 | None | None | N |
E/C | 0.6673 | likely_pathogenic | 0.6348 | pathogenic | 0.062 | Stabilizing | 0.788 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/D | 0.1379 | likely_benign | 0.1326 | benign | -1.122 | Destabilizing | 0.003 | N | 0.431 | neutral | N | 0.298556188 | None | None | N |
E/F | 0.5284 | ambiguous | 0.5215 | ambiguous | 0.989 | Stabilizing | None | N | 0.459 | neutral | None | None | None | None | N |
E/G | 0.1502 | likely_benign | 0.1485 | benign | -0.358 | Destabilizing | 0.007 | N | 0.539 | neutral | N | 0.474896675 | None | None | N |
E/H | 0.1717 | likely_benign | 0.1661 | benign | 0.811 | Stabilizing | None | N | 0.222 | neutral | None | None | None | None | N |
E/I | 0.3162 | likely_benign | 0.3159 | benign | 1.321 | Stabilizing | 0.044 | N | 0.67 | neutral | None | None | None | None | N |
E/K | 0.1233 | likely_benign | 0.1249 | benign | 0.161 | Stabilizing | 0.003 | N | 0.449 | neutral | N | 0.46691191 | None | None | N |
E/L | 0.175 | likely_benign | 0.1641 | benign | 1.321 | Stabilizing | 0.009 | N | 0.567 | neutral | None | None | None | None | N |
E/M | 0.3418 | ambiguous | 0.3265 | benign | 1.579 | Stabilizing | 0.245 | N | 0.698 | prob.neutral | None | None | None | None | N |
E/N | 0.1929 | likely_benign | 0.1846 | benign | -0.795 | Destabilizing | None | N | 0.227 | neutral | None | None | None | None | N |
E/P | 0.3916 | ambiguous | 0.3546 | ambiguous | 0.935 | Stabilizing | 0.085 | N | 0.569 | neutral | None | None | None | None | N |
E/Q | 0.0622 | likely_benign | 0.0642 | benign | -0.488 | Destabilizing | None | N | 0.207 | neutral | N | 0.358725652 | None | None | N |
E/R | 0.1505 | likely_benign | 0.1549 | benign | 0.351 | Stabilizing | 0.009 | N | 0.468 | neutral | None | None | None | None | N |
E/S | 0.1812 | likely_benign | 0.1775 | benign | -1.035 | Destabilizing | 0.004 | N | 0.447 | neutral | None | None | None | None | N |
E/T | 0.2208 | likely_benign | 0.22 | benign | -0.616 | Destabilizing | 0.018 | N | 0.502 | neutral | None | None | None | None | N |
E/V | 0.1981 | likely_benign | 0.1953 | benign | 0.935 | Stabilizing | 0.014 | N | 0.59 | neutral | N | 0.504872865 | None | None | N |
E/W | 0.6548 | likely_pathogenic | 0.6362 | pathogenic | 1.187 | Stabilizing | 0.788 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/Y | 0.3495 | ambiguous | 0.3331 | benign | 1.295 | Stabilizing | 0.009 | N | 0.596 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.