Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8147 | 24664;24665;24666 | chr2:178718761;178718760;178718759 | chr2:179583488;179583487;179583486 |
N2AB | 7830 | 23713;23714;23715 | chr2:178718761;178718760;178718759 | chr2:179583488;179583487;179583486 |
N2A | 6903 | 20932;20933;20934 | chr2:178718761;178718760;178718759 | chr2:179583488;179583487;179583486 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.09 | N | 0.485 | 0.245 | 0.361360026772 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/E | None | None | 0.001 | N | 0.174 | 0.119 | 0.141422826196 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/Y | None | None | 0.912 | N | 0.621 | 0.363 | 0.653592515387 | gnomAD-4.0.0 | 1.59131E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1812 | likely_benign | 0.2115 | benign | -0.638 | Destabilizing | 0.09 | N | 0.485 | neutral | N | 0.514009637 | None | None | N |
D/C | 0.6695 | likely_pathogenic | 0.7036 | pathogenic | -0.131 | Destabilizing | 0.981 | D | 0.617 | neutral | None | None | None | None | N |
D/E | 0.142 | likely_benign | 0.1582 | benign | -0.672 | Destabilizing | 0.001 | N | 0.174 | neutral | N | 0.407380817 | None | None | N |
D/F | 0.4682 | ambiguous | 0.5082 | ambiguous | -0.45 | Destabilizing | 0.818 | D | 0.627 | neutral | None | None | None | None | N |
D/G | 0.2246 | likely_benign | 0.2713 | benign | -0.942 | Destabilizing | 0.324 | N | 0.526 | neutral | D | 0.533808906 | None | None | N |
D/H | 0.2677 | likely_benign | 0.3145 | benign | -0.758 | Destabilizing | 0.773 | D | 0.58 | neutral | D | 0.526266858 | None | None | N |
D/I | 0.2412 | likely_benign | 0.2743 | benign | 0.153 | Stabilizing | 0.241 | N | 0.589 | neutral | None | None | None | None | N |
D/K | 0.3379 | likely_benign | 0.4109 | ambiguous | -0.251 | Destabilizing | 0.241 | N | 0.525 | neutral | None | None | None | None | N |
D/L | 0.3243 | likely_benign | 0.3704 | ambiguous | 0.153 | Stabilizing | 0.241 | N | 0.553 | neutral | None | None | None | None | N |
D/M | 0.5306 | ambiguous | 0.5752 | pathogenic | 0.65 | Stabilizing | 0.944 | D | 0.603 | neutral | None | None | None | None | N |
D/N | 0.098 | likely_benign | 0.109 | benign | -0.617 | Destabilizing | 0.324 | N | 0.508 | neutral | N | 0.483380085 | None | None | N |
D/P | 0.6518 | likely_pathogenic | 0.7224 | pathogenic | -0.087 | Destabilizing | 0.818 | D | 0.595 | neutral | None | None | None | None | N |
D/Q | 0.3038 | likely_benign | 0.3597 | ambiguous | -0.523 | Destabilizing | 0.241 | N | 0.507 | neutral | None | None | None | None | N |
D/R | 0.364 | ambiguous | 0.444 | ambiguous | -0.155 | Destabilizing | 0.69 | D | 0.621 | neutral | None | None | None | None | N |
D/S | 0.1315 | likely_benign | 0.1496 | benign | -0.822 | Destabilizing | 0.241 | N | 0.471 | neutral | None | None | None | None | N |
D/T | 0.2156 | likely_benign | 0.2491 | benign | -0.575 | Destabilizing | 0.008 | N | 0.313 | neutral | None | None | None | None | N |
D/V | 0.1584 | likely_benign | 0.18 | benign | -0.087 | Destabilizing | 0.006 | N | 0.385 | neutral | N | 0.467757272 | None | None | N |
D/W | 0.8426 | likely_pathogenic | 0.8711 | pathogenic | -0.281 | Destabilizing | 0.981 | D | 0.632 | neutral | None | None | None | None | N |
D/Y | 0.1894 | likely_benign | 0.2031 | benign | -0.214 | Destabilizing | 0.912 | D | 0.621 | neutral | N | 0.484491469 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.