Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8156 | 24691;24692;24693 | chr2:178718734;178718733;178718732 | chr2:179583461;179583460;179583459 |
N2AB | 7839 | 23740;23741;23742 | chr2:178718734;178718733;178718732 | chr2:179583461;179583460;179583459 |
N2A | 6912 | 20959;20960;20961 | chr2:178718734;178718733;178718732 | chr2:179583461;179583460;179583459 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 1.0 | D | 0.747 | 0.563 | 0.616597772999 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.669 | likely_pathogenic | 0.6509 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
A/D | 0.7471 | likely_pathogenic | 0.6346 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.513715447 | None | None | I |
A/E | 0.6531 | likely_pathogenic | 0.548 | ambiguous | -0.66 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
A/F | 0.3868 | ambiguous | 0.3653 | ambiguous | -0.918 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
A/G | 0.26 | likely_benign | 0.2577 | benign | -0.195 | Destabilizing | 1.0 | D | 0.591 | neutral | N | 0.509547937 | None | None | I |
A/H | 0.7353 | likely_pathogenic | 0.6744 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
A/I | 0.3308 | likely_benign | 0.304 | benign | -0.407 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
A/K | 0.777 | likely_pathogenic | 0.6985 | pathogenic | -0.472 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
A/L | 0.3877 | ambiguous | 0.3143 | benign | -0.407 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
A/M | 0.3505 | ambiguous | 0.3093 | benign | -0.535 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
A/N | 0.6098 | likely_pathogenic | 0.5493 | ambiguous | -0.169 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
A/P | 0.9367 | likely_pathogenic | 0.9101 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.545809354 | None | None | I |
A/Q | 0.6649 | likely_pathogenic | 0.5838 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
A/R | 0.6559 | likely_pathogenic | 0.5607 | ambiguous | -0.05 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
A/S | 0.1451 | likely_benign | 0.1393 | benign | -0.355 | Destabilizing | 1.0 | D | 0.632 | neutral | N | 0.499824247 | None | None | I |
A/T | 0.1683 | likely_benign | 0.1495 | benign | -0.436 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.519636795 | None | None | I |
A/V | 0.1383 | likely_benign | 0.1302 | benign | -0.315 | Destabilizing | 1.0 | D | 0.67 | neutral | N | 0.481571931 | None | None | I |
A/W | 0.8887 | likely_pathogenic | 0.8539 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
A/Y | 0.6685 | likely_pathogenic | 0.6316 | pathogenic | -0.694 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.