Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8157 | 24694;24695;24696 | chr2:178718731;178718730;178718729 | chr2:179583458;179583457;179583456 |
N2AB | 7840 | 23743;23744;23745 | chr2:178718731;178718730;178718729 | chr2:179583458;179583457;179583456 |
N2A | 6913 | 20962;20963;20964 | chr2:178718731;178718730;178718729 | chr2:179583458;179583457;179583456 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs753025964 | -0.455 | 1.0 | D | 0.789 | 0.627 | 0.546562531242 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
G/S | rs753025964 | -0.455 | 1.0 | D | 0.789 | 0.627 | 0.546562531242 | gnomAD-4.0.0 | 1.64213E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.15877E-05 | 0 | 0 |
G/V | None | None | 1.0 | D | 0.819 | 0.691 | 0.933750783859 | gnomAD-4.0.0 | 1.59131E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85842E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.5911 | likely_pathogenic | 0.5763 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | D | 0.616623529 | None | None | I |
G/C | 0.8997 | likely_pathogenic | 0.8816 | pathogenic | -0.77 | Destabilizing | 1.0 | D | 0.798 | deleterious | D | 0.643372466 | None | None | I |
G/D | 0.8727 | likely_pathogenic | 0.8207 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.61621992 | None | None | I |
G/E | 0.9084 | likely_pathogenic | 0.8758 | pathogenic | -0.908 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/F | 0.9718 | likely_pathogenic | 0.9575 | pathogenic | -1.143 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
G/H | 0.961 | likely_pathogenic | 0.9376 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/I | 0.9618 | likely_pathogenic | 0.9532 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
G/K | 0.9513 | likely_pathogenic | 0.9322 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/L | 0.96 | likely_pathogenic | 0.95 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
G/M | 0.9719 | likely_pathogenic | 0.9633 | pathogenic | -0.399 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/N | 0.9148 | likely_pathogenic | 0.8782 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/P | 0.9972 | likely_pathogenic | 0.996 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/Q | 0.9198 | likely_pathogenic | 0.8863 | pathogenic | -0.64 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
G/R | 0.8862 | likely_pathogenic | 0.8504 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.626344084 | None | None | I |
G/S | 0.5104 | ambiguous | 0.429 | ambiguous | -0.374 | Destabilizing | 1.0 | D | 0.789 | deleterious | D | 0.599998755 | None | None | I |
G/T | 0.8722 | likely_pathogenic | 0.8285 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/V | 0.9122 | likely_pathogenic | 0.8973 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.642968858 | None | None | I |
G/W | 0.968 | likely_pathogenic | 0.9543 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
G/Y | 0.9591 | likely_pathogenic | 0.941 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.