Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8159 | 24700;24701;24702 | chr2:178718725;178718724;178718723 | chr2:179583452;179583451;179583450 |
N2AB | 7842 | 23749;23750;23751 | chr2:178718725;178718724;178718723 | chr2:179583452;179583451;179583450 |
N2A | 6915 | 20968;20969;20970 | chr2:178718725;178718724;178718723 | chr2:179583452;179583451;179583450 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.454 | N | 0.499 | 0.298 | 0.276482976112 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5468 | ambiguous | 0.5356 | ambiguous | -0.762 | Destabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | I |
A/D | 0.1961 | likely_benign | 0.2096 | benign | -0.524 | Destabilizing | 0.012 | N | 0.484 | neutral | N | 0.480726569 | None | None | I |
A/E | 0.2365 | likely_benign | 0.2297 | benign | -0.577 | Destabilizing | 0.067 | N | 0.387 | neutral | None | None | None | None | I |
A/F | 0.3332 | likely_benign | 0.31 | benign | -0.881 | Destabilizing | 0.974 | D | 0.649 | neutral | None | None | None | None | I |
A/G | 0.2132 | likely_benign | 0.2064 | benign | -0.941 | Destabilizing | 0.801 | D | 0.497 | neutral | N | 0.498471575 | None | None | I |
A/H | 0.4809 | ambiguous | 0.4604 | ambiguous | -1.034 | Destabilizing | 0.998 | D | 0.6 | neutral | None | None | None | None | I |
A/I | 0.1813 | likely_benign | 0.1768 | benign | -0.263 | Destabilizing | 0.728 | D | 0.586 | neutral | None | None | None | None | I |
A/K | 0.4067 | ambiguous | 0.3795 | ambiguous | -0.893 | Destabilizing | 0.842 | D | 0.564 | neutral | None | None | None | None | I |
A/L | 0.2071 | likely_benign | 0.2011 | benign | -0.263 | Destabilizing | 0.728 | D | 0.539 | neutral | None | None | None | None | I |
A/M | 0.2266 | likely_benign | 0.2217 | benign | -0.257 | Destabilizing | 0.974 | D | 0.575 | neutral | None | None | None | None | I |
A/N | 0.2409 | likely_benign | 0.2635 | benign | -0.58 | Destabilizing | 0.904 | D | 0.641 | neutral | None | None | None | None | I |
A/P | 0.9101 | likely_pathogenic | 0.8954 | pathogenic | -0.371 | Destabilizing | 0.966 | D | 0.614 | neutral | D | 0.528350209 | None | None | I |
A/Q | 0.3498 | ambiguous | 0.3251 | benign | -0.74 | Destabilizing | 0.949 | D | 0.616 | neutral | None | None | None | None | I |
A/R | 0.3644 | ambiguous | 0.3283 | benign | -0.584 | Destabilizing | 0.949 | D | 0.61 | neutral | None | None | None | None | I |
A/S | 0.0932 | likely_benign | 0.0968 | benign | -0.98 | Destabilizing | 0.454 | N | 0.499 | neutral | N | 0.487645021 | None | None | I |
A/T | 0.0765 | likely_benign | 0.0784 | benign | -0.932 | Destabilizing | 0.051 | N | 0.409 | neutral | N | 0.49310275 | None | None | I |
A/V | 0.1008 | likely_benign | 0.0987 | benign | -0.371 | Destabilizing | 0.051 | N | 0.368 | neutral | D | 0.524573347 | None | None | I |
A/W | 0.8217 | likely_pathogenic | 0.7769 | pathogenic | -1.166 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | I |
A/Y | 0.49 | ambiguous | 0.4652 | ambiguous | -0.759 | Destabilizing | 0.991 | D | 0.64 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.