Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8163 | 24712;24713;24714 | chr2:178718713;178718712;178718711 | chr2:179583440;179583439;179583438 |
N2AB | 7846 | 23761;23762;23763 | chr2:178718713;178718712;178718711 | chr2:179583440;179583439;179583438 |
N2A | 6919 | 20980;20981;20982 | chr2:178718713;178718712;178718711 | chr2:179583440;179583439;179583438 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1019848168 | 0.394 | 0.062 | D | 0.667 | 0.234 | 0.368743488249 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1019848168 | 0.394 | 0.062 | D | 0.667 | 0.234 | 0.368743488249 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1019848168 | 0.394 | 0.062 | D | 0.667 | 0.234 | 0.368743488249 | gnomAD-4.0.0 | 1.31446E-05 | None | None | None | None | N | None | 4.82509E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0615 | likely_benign | 0.0699 | benign | -1.032 | Destabilizing | None | N | 0.153 | neutral | N | 0.420056539 | None | None | N |
T/C | 0.4126 | ambiguous | 0.4557 | ambiguous | -0.853 | Destabilizing | 0.824 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/D | 0.8011 | likely_pathogenic | 0.8552 | pathogenic | -1.797 | Destabilizing | 0.38 | N | 0.737 | prob.delet. | None | None | None | None | N |
T/E | 0.7198 | likely_pathogenic | 0.7702 | pathogenic | -1.628 | Destabilizing | 0.149 | N | 0.714 | prob.delet. | None | None | None | None | N |
T/F | 0.5148 | ambiguous | 0.5469 | ambiguous | -0.823 | Destabilizing | 0.555 | D | 0.746 | deleterious | None | None | None | None | N |
T/G | 0.2932 | likely_benign | 0.3354 | benign | -1.435 | Destabilizing | 0.081 | N | 0.654 | neutral | None | None | None | None | N |
T/H | 0.604 | likely_pathogenic | 0.6649 | pathogenic | -1.724 | Destabilizing | 0.935 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/I | 0.249 | likely_benign | 0.3336 | benign | 0.011 | Stabilizing | 0.062 | N | 0.667 | neutral | D | 0.531824606 | None | None | N |
T/K | 0.5953 | likely_pathogenic | 0.6273 | pathogenic | -0.757 | Destabilizing | 0.117 | N | 0.717 | prob.delet. | N | 0.51757288 | None | None | N |
T/L | 0.1919 | likely_benign | 0.1987 | benign | 0.011 | Stabilizing | 0.035 | N | 0.603 | neutral | None | None | None | None | N |
T/M | 0.1439 | likely_benign | 0.1288 | benign | 0.214 | Stabilizing | 0.555 | D | 0.708 | prob.delet. | None | None | None | None | N |
T/N | 0.3696 | ambiguous | 0.4463 | ambiguous | -1.485 | Destabilizing | 0.555 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/P | 0.6754 | likely_pathogenic | 0.7227 | pathogenic | -0.304 | Destabilizing | 0.317 | N | 0.747 | deleterious | N | 0.51782637 | None | None | N |
T/Q | 0.5406 | ambiguous | 0.5715 | pathogenic | -1.311 | Destabilizing | 0.555 | D | 0.742 | deleterious | None | None | None | None | N |
T/R | 0.4574 | ambiguous | 0.507 | ambiguous | -0.909 | Destabilizing | 0.317 | N | 0.741 | deleterious | N | 0.51757288 | None | None | N |
T/S | 0.1354 | likely_benign | 0.151 | benign | -1.606 | Destabilizing | 0.027 | N | 0.553 | neutral | N | 0.513356276 | None | None | N |
T/V | 0.1499 | likely_benign | 0.1738 | benign | -0.304 | Destabilizing | 0.002 | N | 0.209 | neutral | None | None | None | None | N |
T/W | 0.8749 | likely_pathogenic | 0.8894 | pathogenic | -1.022 | Destabilizing | 0.935 | D | 0.704 | prob.neutral | None | None | None | None | N |
T/Y | 0.6527 | likely_pathogenic | 0.7079 | pathogenic | -0.639 | Destabilizing | 0.555 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.