Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8165 | 24718;24719;24720 | chr2:178718707;178718706;178718705 | chr2:179583434;179583433;179583432 |
N2AB | 7848 | 23767;23768;23769 | chr2:178718707;178718706;178718705 | chr2:179583434;179583433;179583432 |
N2A | 6921 | 20986;20987;20988 | chr2:178718707;178718706;178718705 | chr2:179583434;179583433;179583432 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs1060500582 | None | 0.996 | N | 0.603 | 0.35 | 0.506793516358 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93648E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/I | rs1060500582 | None | 0.996 | N | 0.603 | 0.35 | 0.506793516358 | gnomAD-4.0.0 | 1.85968E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22975E-05 | None | 0 | 0 | 8.47828E-07 | 0 | 1.60149E-05 |
L/P | None | None | 1.0 | D | 0.905 | 0.747 | 0.892836903121 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
L/V | None | None | 0.996 | N | 0.606 | 0.348 | 0.485348376517 | gnomAD-4.0.0 | 6.844E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99683E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8102 | likely_pathogenic | 0.8308 | pathogenic | -2.606 | Highly Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
L/C | 0.8113 | likely_pathogenic | 0.8109 | pathogenic | -1.9 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/D | 0.9986 | likely_pathogenic | 0.9991 | pathogenic | -3.0 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
L/E | 0.9922 | likely_pathogenic | 0.9948 | pathogenic | -2.664 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/F | 0.5514 | ambiguous | 0.6194 | pathogenic | -1.635 | Destabilizing | 0.64 | D | 0.459 | neutral | N | 0.517503066 | None | None | N |
L/G | 0.9711 | likely_pathogenic | 0.9764 | pathogenic | -3.244 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/H | 0.9634 | likely_pathogenic | 0.9747 | pathogenic | -3.041 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.548231074 | None | None | N |
L/I | 0.1168 | likely_benign | 0.1299 | benign | -0.692 | Destabilizing | 0.996 | D | 0.603 | neutral | N | 0.497913873 | None | None | N |
L/K | 0.9869 | likely_pathogenic | 0.9901 | pathogenic | -1.905 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/M | 0.3382 | likely_benign | 0.3663 | ambiguous | -0.872 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/N | 0.9881 | likely_pathogenic | 0.9921 | pathogenic | -2.612 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/P | 0.9922 | likely_pathogenic | 0.9933 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.548231074 | None | None | N |
L/Q | 0.9566 | likely_pathogenic | 0.9695 | pathogenic | -2.206 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/R | 0.9562 | likely_pathogenic | 0.9668 | pathogenic | -2.082 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.548231074 | None | None | N |
L/S | 0.9615 | likely_pathogenic | 0.9727 | pathogenic | -3.247 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/T | 0.8715 | likely_pathogenic | 0.9022 | pathogenic | -2.727 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/V | 0.117 | likely_benign | 0.1244 | benign | -1.32 | Destabilizing | 0.996 | D | 0.606 | neutral | N | 0.480006519 | None | None | N |
L/W | 0.9417 | likely_pathogenic | 0.9563 | pathogenic | -2.006 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/Y | 0.9348 | likely_pathogenic | 0.9454 | pathogenic | -1.758 | Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.