Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC816524718;24719;24720 chr2:178718707;178718706;178718705chr2:179583434;179583433;179583432
N2AB784823767;23768;23769 chr2:178718707;178718706;178718705chr2:179583434;179583433;179583432
N2A692120986;20987;20988 chr2:178718707;178718706;178718705chr2:179583434;179583433;179583432
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-66
  • Domain position: 88
  • Structural Position: 174
  • Q(SASA): 0.051
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/I rs1060500582 None 0.996 N 0.603 0.35 0.506793516358 gnomAD-3.1.2 6.58E-06 None None None None N None 0 0 0 0 1.93648E-04 None 0 0 0 0 0
L/I rs1060500582 None 0.996 N 0.603 0.35 0.506793516358 gnomAD-4.0.0 1.85968E-06 None None None None N None 0 0 None 0 2.22975E-05 None 0 0 8.47828E-07 0 1.60149E-05
L/P None None 1.0 D 0.905 0.747 0.892836903121 gnomAD-4.0.0 1.20032E-06 None None None None N None 0 0 None 0 0 None 0 0 1.3125E-06 0 0
L/V None None 0.996 N 0.606 0.348 0.485348376517 gnomAD-4.0.0 6.844E-07 None None None None N None 0 0 None 0 0 None 0 0 8.99683E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.8102 likely_pathogenic 0.8308 pathogenic -2.606 Highly Destabilizing 0.998 D 0.759 deleterious None None None None N
L/C 0.8113 likely_pathogenic 0.8109 pathogenic -1.9 Destabilizing 1.0 D 0.862 deleterious None None None None N
L/D 0.9986 likely_pathogenic 0.9991 pathogenic -3.0 Highly Destabilizing 1.0 D 0.904 deleterious None None None None N
L/E 0.9922 likely_pathogenic 0.9948 pathogenic -2.664 Highly Destabilizing 1.0 D 0.893 deleterious None None None None N
L/F 0.5514 ambiguous 0.6194 pathogenic -1.635 Destabilizing 0.64 D 0.459 neutral N 0.517503066 None None N
L/G 0.9711 likely_pathogenic 0.9764 pathogenic -3.244 Highly Destabilizing 1.0 D 0.9 deleterious None None None None N
L/H 0.9634 likely_pathogenic 0.9747 pathogenic -3.041 Highly Destabilizing 1.0 D 0.895 deleterious D 0.548231074 None None N
L/I 0.1168 likely_benign 0.1299 benign -0.692 Destabilizing 0.996 D 0.603 neutral N 0.497913873 None None N
L/K 0.9869 likely_pathogenic 0.9901 pathogenic -1.905 Destabilizing 1.0 D 0.899 deleterious None None None None N
L/M 0.3382 likely_benign 0.3663 ambiguous -0.872 Destabilizing 1.0 D 0.805 deleterious None None None None N
L/N 0.9881 likely_pathogenic 0.9921 pathogenic -2.612 Highly Destabilizing 1.0 D 0.903 deleterious None None None None N
L/P 0.9922 likely_pathogenic 0.9933 pathogenic -1.32 Destabilizing 1.0 D 0.905 deleterious D 0.548231074 None None N
L/Q 0.9566 likely_pathogenic 0.9695 pathogenic -2.206 Highly Destabilizing 1.0 D 0.909 deleterious None None None None N
L/R 0.9562 likely_pathogenic 0.9668 pathogenic -2.082 Highly Destabilizing 1.0 D 0.899 deleterious D 0.548231074 None None N
L/S 0.9615 likely_pathogenic 0.9727 pathogenic -3.247 Highly Destabilizing 1.0 D 0.893 deleterious None None None None N
L/T 0.8715 likely_pathogenic 0.9022 pathogenic -2.727 Highly Destabilizing 1.0 D 0.853 deleterious None None None None N
L/V 0.117 likely_benign 0.1244 benign -1.32 Destabilizing 0.996 D 0.606 neutral N 0.480006519 None None N
L/W 0.9417 likely_pathogenic 0.9563 pathogenic -2.006 Highly Destabilizing 1.0 D 0.887 deleterious None None None None N
L/Y 0.9348 likely_pathogenic 0.9454 pathogenic -1.758 Destabilizing 0.998 D 0.871 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.