Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8166 | 24721;24722;24723 | chr2:178718704;178718703;178718702 | chr2:179583431;179583430;179583429 |
N2AB | 7849 | 23770;23771;23772 | chr2:178718704;178718703;178718702 | chr2:179583431;179583430;179583429 |
N2A | 6922 | 20989;20990;20991 | chr2:178718704;178718703;178718702 | chr2:179583431;179583430;179583429 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | None | N | 0.069 | 0.17 | 0.26547132957 | gnomAD-4.0.0 | 1.59266E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86121E-06 | 0 | 0 |
F/S | None | None | 0.021 | N | 0.219 | 0.182 | 0.592052101994 | gnomAD-4.0.0 | 6.84458E-07 | None | None | None | None | N | None | 2.98882E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.2783 | likely_benign | 0.3275 | benign | -1.666 | Destabilizing | 0.061 | N | 0.355 | neutral | None | None | None | None | N |
F/C | 0.3861 | ambiguous | 0.3902 | ambiguous | -0.718 | Destabilizing | 0.921 | D | 0.36 | neutral | N | 0.48570601 | None | None | N |
F/D | 0.5402 | ambiguous | 0.5971 | pathogenic | 0.357 | Stabilizing | 0.418 | N | 0.477 | neutral | None | None | None | None | N |
F/E | 0.59 | likely_pathogenic | 0.6329 | pathogenic | 0.392 | Stabilizing | 0.418 | N | 0.469 | neutral | None | None | None | None | N |
F/G | 0.6135 | likely_pathogenic | 0.7051 | pathogenic | -1.941 | Destabilizing | 0.418 | N | 0.452 | neutral | None | None | None | None | N |
F/H | 0.3161 | likely_benign | 0.3212 | benign | -0.181 | Destabilizing | 0.94 | D | 0.38 | neutral | None | None | None | None | N |
F/I | 0.148 | likely_benign | 0.1689 | benign | -0.892 | Destabilizing | 0.002 | N | 0.101 | neutral | N | 0.467237197 | None | None | N |
F/K | 0.5702 | likely_pathogenic | 0.6211 | pathogenic | -0.598 | Destabilizing | 0.418 | N | 0.461 | neutral | None | None | None | None | N |
F/L | 0.6259 | likely_pathogenic | 0.6776 | pathogenic | -0.892 | Destabilizing | None | N | 0.069 | neutral | N | 0.448286077 | None | None | N |
F/M | 0.3808 | ambiguous | 0.4261 | ambiguous | -0.665 | Destabilizing | 0.716 | D | 0.318 | neutral | None | None | None | None | N |
F/N | 0.3515 | ambiguous | 0.4065 | ambiguous | -0.531 | Destabilizing | 0.418 | N | 0.453 | neutral | None | None | None | None | N |
F/P | 0.963 | likely_pathogenic | 0.9748 | pathogenic | -1.136 | Destabilizing | 0.836 | D | 0.433 | neutral | None | None | None | None | N |
F/Q | 0.4811 | ambiguous | 0.5209 | ambiguous | -0.613 | Destabilizing | 0.836 | D | 0.427 | neutral | None | None | None | None | N |
F/R | 0.416 | ambiguous | 0.4529 | ambiguous | 0.027 | Stabilizing | 0.836 | D | 0.443 | neutral | None | None | None | None | N |
F/S | 0.1648 | likely_benign | 0.199 | benign | -1.386 | Destabilizing | 0.021 | N | 0.219 | neutral | N | 0.457481563 | None | None | N |
F/T | 0.2054 | likely_benign | 0.2481 | benign | -1.262 | Destabilizing | 0.004 | N | 0.16 | neutral | None | None | None | None | N |
F/V | 0.1532 | likely_benign | 0.1697 | benign | -1.136 | Destabilizing | 0.017 | N | 0.327 | neutral | N | 0.491114134 | None | None | N |
F/W | 0.4136 | ambiguous | 0.4495 | ambiguous | -0.194 | Destabilizing | 0.983 | D | 0.364 | neutral | None | None | None | None | N |
F/Y | 0.1317 | likely_benign | 0.1364 | benign | -0.343 | Destabilizing | 0.523 | D | 0.311 | neutral | N | 0.49827218 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.