Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8167 | 24724;24725;24726 | chr2:178718701;178718700;178718699 | chr2:179583428;179583427;179583426 |
N2AB | 7850 | 23773;23774;23775 | chr2:178718701;178718700;178718699 | chr2:179583428;179583427;179583426 |
N2A | 6923 | 20992;20993;20994 | chr2:178718701;178718700;178718699 | chr2:179583428;179583427;179583426 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.999 | D | 0.843 | 0.601 | 0.734339438395 | gnomAD-4.0.0 | 1.593E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86172E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8015 | likely_pathogenic | 0.8224 | pathogenic | -2.044 | Highly Destabilizing | 0.998 | D | 0.693 | prob.neutral | D | 0.634073367 | None | None | N |
V/C | 0.9589 | likely_pathogenic | 0.9502 | pathogenic | -1.517 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
V/D | 0.9952 | likely_pathogenic | 0.9948 | pathogenic | -2.652 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/E | 0.979 | likely_pathogenic | 0.9758 | pathogenic | -2.451 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.63467878 | None | None | N |
V/F | 0.844 | likely_pathogenic | 0.8563 | pathogenic | -1.194 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/G | 0.9069 | likely_pathogenic | 0.9059 | pathogenic | -2.539 | Highly Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.63467878 | None | None | N |
V/H | 0.9935 | likely_pathogenic | 0.9926 | pathogenic | -2.28 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/I | 0.0995 | likely_benign | 0.1124 | benign | -0.669 | Destabilizing | 0.813 | D | 0.549 | neutral | None | None | None | None | N |
V/K | 0.985 | likely_pathogenic | 0.9806 | pathogenic | -1.664 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
V/L | 0.6136 | likely_pathogenic | 0.6356 | pathogenic | -0.669 | Destabilizing | 0.981 | D | 0.705 | prob.neutral | D | 0.578657454 | None | None | N |
V/M | 0.6789 | likely_pathogenic | 0.702 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.843 | deleterious | D | 0.634275171 | None | None | N |
V/N | 0.9821 | likely_pathogenic | 0.982 | pathogenic | -1.949 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/P | 0.961 | likely_pathogenic | 0.966 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
V/Q | 0.9702 | likely_pathogenic | 0.9648 | pathogenic | -1.817 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
V/R | 0.9702 | likely_pathogenic | 0.9621 | pathogenic | -1.468 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/S | 0.9076 | likely_pathogenic | 0.9172 | pathogenic | -2.516 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
V/T | 0.8456 | likely_pathogenic | 0.8459 | pathogenic | -2.189 | Highly Destabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | N |
V/W | 0.9953 | likely_pathogenic | 0.9955 | pathogenic | -1.713 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
V/Y | 0.9863 | likely_pathogenic | 0.9858 | pathogenic | -1.34 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.