Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8174 | 24745;24746;24747 | chr2:178718586;178718585;178718584 | chr2:179583313;179583312;179583311 |
N2AB | 7857 | 23794;23795;23796 | chr2:178718586;178718585;178718584 | chr2:179583313;179583312;179583311 |
N2A | 6930 | 21013;21014;21015 | chr2:178718586;178718585;178718584 | chr2:179583313;179583312;179583311 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs727504961 | None | 0.454 | N | 0.276 | 0.219 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/M | rs727504961 | None | 0.454 | N | 0.276 | 0.219 | None | gnomAD-4.0.0 | 3.10159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.24185E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2405 | likely_benign | 0.2239 | benign | -0.782 | Destabilizing | 0.454 | N | 0.3 | neutral | N | 0.478595762 | None | None | N |
V/C | 0.8123 | likely_pathogenic | 0.7346 | pathogenic | -0.751 | Destabilizing | 0.998 | D | 0.371 | neutral | None | None | None | None | N |
V/D | 0.4416 | ambiguous | 0.4158 | ambiguous | -0.104 | Destabilizing | 0.949 | D | 0.425 | neutral | None | None | None | None | N |
V/E | 0.2401 | likely_benign | 0.2148 | benign | -0.171 | Destabilizing | 0.934 | D | 0.399 | neutral | N | 0.46963254 | None | None | N |
V/F | 0.2155 | likely_benign | 0.1818 | benign | -0.699 | Destabilizing | 0.037 | N | 0.241 | neutral | None | None | None | None | N |
V/G | 0.2608 | likely_benign | 0.2447 | benign | -0.988 | Destabilizing | 0.801 | D | 0.394 | neutral | N | 0.502575821 | None | None | N |
V/H | 0.5576 | ambiguous | 0.4936 | ambiguous | -0.383 | Destabilizing | 0.998 | D | 0.414 | neutral | None | None | None | None | N |
V/I | 0.0786 | likely_benign | 0.0771 | benign | -0.367 | Destabilizing | 0.525 | D | 0.304 | neutral | None | None | None | None | N |
V/K | 0.3163 | likely_benign | 0.2723 | benign | -0.592 | Destabilizing | 0.949 | D | 0.396 | neutral | None | None | None | None | N |
V/L | 0.1781 | likely_benign | 0.1553 | benign | -0.367 | Destabilizing | 0.223 | N | 0.315 | neutral | N | 0.504556994 | None | None | N |
V/M | 0.1596 | likely_benign | 0.1418 | benign | -0.391 | Destabilizing | 0.454 | N | 0.276 | neutral | N | 0.472608281 | None | None | N |
V/N | 0.3236 | likely_benign | 0.3092 | benign | -0.393 | Destabilizing | 0.949 | D | 0.436 | neutral | None | None | None | None | N |
V/P | 0.8785 | likely_pathogenic | 0.8662 | pathogenic | -0.469 | Destabilizing | 0.974 | D | 0.408 | neutral | None | None | None | None | N |
V/Q | 0.2449 | likely_benign | 0.223 | benign | -0.58 | Destabilizing | 0.974 | D | 0.407 | neutral | None | None | None | None | N |
V/R | 0.2853 | likely_benign | 0.2496 | benign | -0.085 | Destabilizing | 0.974 | D | 0.434 | neutral | None | None | None | None | N |
V/S | 0.2196 | likely_benign | 0.2195 | benign | -0.904 | Destabilizing | 0.172 | N | 0.249 | neutral | None | None | None | None | N |
V/T | 0.1892 | likely_benign | 0.1814 | benign | -0.859 | Destabilizing | 0.067 | N | 0.161 | neutral | None | None | None | None | N |
V/W | 0.8399 | likely_pathogenic | 0.7745 | pathogenic | -0.779 | Destabilizing | 0.998 | D | 0.452 | neutral | None | None | None | None | N |
V/Y | 0.6047 | likely_pathogenic | 0.5363 | ambiguous | -0.492 | Destabilizing | 0.904 | D | 0.389 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.