Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8177 | 24754;24755;24756 | chr2:178718577;178718576;178718575 | chr2:179583304;179583303;179583302 |
N2AB | 7860 | 23803;23804;23805 | chr2:178718577;178718576;178718575 | chr2:179583304;179583303;179583302 |
N2A | 6933 | 21022;21023;21024 | chr2:178718577;178718576;178718575 | chr2:179583304;179583303;179583302 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | None | None | 0.999 | N | 0.643 | 0.404 | 0.798450862424 | gnomAD-4.0.0 | 1.59417E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43488E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8134 | likely_pathogenic | 0.7971 | pathogenic | -2.189 | Highly Destabilizing | 0.863 | D | 0.515 | neutral | None | None | None | None | N |
L/C | 0.9276 | likely_pathogenic | 0.9054 | pathogenic | -1.298 | Destabilizing | 0.1 | N | 0.451 | neutral | None | None | None | None | N |
L/D | 0.9965 | likely_pathogenic | 0.9946 | pathogenic | -1.785 | Destabilizing | 0.991 | D | 0.728 | prob.delet. | None | None | None | None | N |
L/E | 0.978 | likely_pathogenic | 0.9704 | pathogenic | -1.644 | Destabilizing | 0.982 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/F | 0.5744 | likely_pathogenic | 0.5313 | ambiguous | -1.295 | Destabilizing | 0.077 | N | 0.339 | neutral | N | 0.495489157 | None | None | N |
L/G | 0.9694 | likely_pathogenic | 0.9613 | pathogenic | -2.666 | Highly Destabilizing | 0.969 | D | 0.669 | neutral | None | None | None | None | N |
L/H | 0.9658 | likely_pathogenic | 0.9496 | pathogenic | -1.906 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/I | 0.2029 | likely_benign | 0.1806 | benign | -0.864 | Destabilizing | 0.759 | D | 0.455 | neutral | None | None | None | None | N |
L/K | 0.9718 | likely_pathogenic | 0.9611 | pathogenic | -1.494 | Destabilizing | 0.884 | D | 0.619 | neutral | None | None | None | None | N |
L/M | 0.2154 | likely_benign | 0.2058 | benign | -0.686 | Destabilizing | 0.988 | D | 0.609 | neutral | N | 0.482411332 | None | None | N |
L/N | 0.9762 | likely_pathogenic | 0.9655 | pathogenic | -1.527 | Destabilizing | 0.991 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/P | 0.6509 | likely_pathogenic | 0.574 | pathogenic | -1.281 | Destabilizing | 0.046 | N | 0.543 | neutral | None | None | None | None | N |
L/Q | 0.922 | likely_pathogenic | 0.8992 | pathogenic | -1.521 | Destabilizing | 0.982 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/R | 0.9592 | likely_pathogenic | 0.9437 | pathogenic | -1.092 | Destabilizing | 0.1 | N | 0.491 | neutral | None | None | None | None | N |
L/S | 0.9608 | likely_pathogenic | 0.9511 | pathogenic | -2.269 | Highly Destabilizing | 0.959 | D | 0.62 | neutral | N | 0.492121796 | None | None | N |
L/T | 0.861 | likely_pathogenic | 0.8343 | pathogenic | -1.988 | Destabilizing | 0.939 | D | 0.577 | neutral | None | None | None | None | N |
L/V | 0.2662 | likely_benign | 0.2304 | benign | -1.281 | Destabilizing | 0.134 | N | 0.191 | neutral | N | 0.488398813 | None | None | N |
L/W | 0.9314 | likely_pathogenic | 0.9078 | pathogenic | -1.525 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.5196338 | None | None | N |
L/Y | 0.9599 | likely_pathogenic | 0.9448 | pathogenic | -1.262 | Destabilizing | 0.964 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.