Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8178 | 24757;24758;24759 | chr2:178718574;178718573;178718572 | chr2:179583301;179583300;179583299 |
N2AB | 7861 | 23806;23807;23808 | chr2:178718574;178718573;178718572 | chr2:179583301;179583300;179583299 |
N2A | 6934 | 21025;21026;21027 | chr2:178718574;178718573;178718572 | chr2:179583301;179583300;179583299 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1164648572 | -0.479 | 0.001 | N | 0.087 | 0.052 | 0.0920862733494 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
A/S | rs1164648572 | -0.479 | 0.001 | N | 0.087 | 0.052 | 0.0920862733494 | gnomAD-4.0.0 | 3.18901E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86512E-06 | 1.43521E-05 | 0 |
A/V | None | None | None | N | 0.063 | 0.132 | 0.262175524916 | gnomAD-4.0.0 | 6.16271E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.10071E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.481 | ambiguous | 0.4969 | ambiguous | -0.852 | Destabilizing | 0.667 | D | 0.378 | neutral | None | None | None | None | N |
A/D | 0.2112 | likely_benign | 0.2222 | benign | -0.439 | Destabilizing | 0.096 | N | 0.453 | neutral | N | 0.478531626 | None | None | N |
A/E | 0.2074 | likely_benign | 0.2142 | benign | -0.571 | Destabilizing | 0.22 | N | 0.419 | neutral | None | None | None | None | N |
A/F | 0.3456 | ambiguous | 0.3727 | ambiguous | -0.807 | Destabilizing | 0.497 | N | 0.479 | neutral | None | None | None | None | N |
A/G | 0.1145 | likely_benign | 0.1217 | benign | -0.326 | Destabilizing | 0.042 | N | 0.261 | neutral | N | 0.491884925 | None | None | N |
A/H | 0.3817 | ambiguous | 0.4015 | ambiguous | -0.319 | Destabilizing | 0.667 | D | 0.434 | neutral | None | None | None | None | N |
A/I | 0.2336 | likely_benign | 0.2483 | benign | -0.279 | Destabilizing | 0.004 | N | 0.165 | neutral | None | None | None | None | N |
A/K | 0.3335 | likely_benign | 0.3583 | ambiguous | -0.656 | Destabilizing | 0.22 | N | 0.42 | neutral | None | None | None | None | N |
A/L | 0.1539 | likely_benign | 0.1628 | benign | -0.279 | Destabilizing | 0.055 | N | 0.346 | neutral | None | None | None | None | N |
A/M | 0.2153 | likely_benign | 0.2217 | benign | -0.502 | Destabilizing | 0.667 | D | 0.411 | neutral | None | None | None | None | N |
A/N | 0.1652 | likely_benign | 0.1801 | benign | -0.369 | Destabilizing | 0.001 | N | 0.21 | neutral | None | None | None | None | N |
A/P | 0.2074 | likely_benign | 0.2453 | benign | -0.241 | Destabilizing | 0.301 | N | 0.454 | neutral | N | 0.454713404 | None | None | N |
A/Q | 0.2588 | likely_benign | 0.2751 | benign | -0.598 | Destabilizing | 0.667 | D | 0.46 | neutral | None | None | None | None | N |
A/R | 0.2915 | likely_benign | 0.3178 | benign | -0.231 | Destabilizing | 0.22 | N | 0.48 | neutral | None | None | None | None | N |
A/S | 0.0818 | likely_benign | 0.0835 | benign | -0.582 | Destabilizing | 0.001 | N | 0.087 | neutral | N | 0.412671993 | None | None | N |
A/T | 0.0754 | likely_benign | 0.0777 | benign | -0.626 | Destabilizing | None | N | 0.08 | neutral | N | 0.420888832 | None | None | N |
A/V | 0.1211 | likely_benign | 0.1264 | benign | -0.241 | Destabilizing | None | N | 0.063 | neutral | N | 0.491711567 | None | None | N |
A/W | 0.667 | likely_pathogenic | 0.6901 | pathogenic | -0.96 | Destabilizing | 0.958 | D | 0.461 | neutral | None | None | None | None | N |
A/Y | 0.4263 | ambiguous | 0.4516 | ambiguous | -0.61 | Destabilizing | 0.667 | D | 0.465 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.