Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8185 | 24778;24779;24780 | chr2:178718553;178718552;178718551 | chr2:179583280;179583279;179583278 |
N2AB | 7868 | 23827;23828;23829 | chr2:178718553;178718552;178718551 | chr2:179583280;179583279;179583278 |
N2A | 6941 | 21046;21047;21048 | chr2:178718553;178718552;178718551 | chr2:179583280;179583279;179583278 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs1199728726 | None | 0.248 | D | 0.491 | 0.504 | 0.726976991548 | gnomAD-4.0.0 | 1.02647E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.2594E-05 | 0 | 1.65706E-05 |
G/R | None | None | 0.151 | D | 0.498 | 0.493 | 0.79385056502 | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88352E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2576 | likely_benign | 0.2656 | benign | -0.333 | Destabilizing | 0.91 | D | 0.413 | neutral | D | 0.631487401 | None | None | I |
G/C | 0.4637 | ambiguous | 0.4899 | ambiguous | -0.926 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
G/D | 0.2811 | likely_benign | 0.279 | benign | -0.577 | Destabilizing | 0.942 | D | 0.574 | neutral | None | None | None | None | I |
G/E | 0.3221 | likely_benign | 0.3077 | benign | -0.741 | Destabilizing | 0.248 | N | 0.491 | neutral | D | 0.61405541 | None | None | I |
G/F | 0.7799 | likely_pathogenic | 0.7806 | pathogenic | -1.08 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
G/H | 0.4469 | ambiguous | 0.4643 | ambiguous | -0.537 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
G/I | 0.6677 | likely_pathogenic | 0.6866 | pathogenic | -0.496 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
G/K | 0.4001 | ambiguous | 0.3905 | ambiguous | -0.701 | Destabilizing | 0.304 | N | 0.445 | neutral | None | None | None | None | I |
G/L | 0.6937 | likely_pathogenic | 0.6986 | pathogenic | -0.496 | Destabilizing | 0.996 | D | 0.678 | prob.neutral | None | None | None | None | I |
G/M | 0.7183 | likely_pathogenic | 0.729 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
G/N | 0.3046 | likely_benign | 0.3152 | benign | -0.434 | Destabilizing | 0.985 | D | 0.487 | neutral | None | None | None | None | I |
G/P | 0.9593 | likely_pathogenic | 0.9591 | pathogenic | -0.41 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
G/Q | 0.3667 | ambiguous | 0.3655 | ambiguous | -0.749 | Destabilizing | 0.991 | D | 0.623 | neutral | None | None | None | None | I |
G/R | 0.2913 | likely_benign | 0.2778 | benign | -0.271 | Destabilizing | 0.151 | N | 0.498 | neutral | D | 0.622170454 | None | None | I |
G/S | 0.1455 | likely_benign | 0.1485 | benign | -0.588 | Destabilizing | 0.97 | D | 0.409 | neutral | None | None | None | None | I |
G/T | 0.339 | likely_benign | 0.3615 | ambiguous | -0.686 | Destabilizing | 0.996 | D | 0.634 | neutral | None | None | None | None | I |
G/V | 0.5324 | ambiguous | 0.5512 | ambiguous | -0.41 | Destabilizing | 0.994 | D | 0.659 | neutral | D | 0.64791037 | None | None | I |
G/W | 0.6589 | likely_pathogenic | 0.6637 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
G/Y | 0.6503 | likely_pathogenic | 0.6543 | pathogenic | -0.849 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.