Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8187 | 24784;24785;24786 | chr2:178718547;178718546;178718545 | chr2:179583274;179583273;179583272 |
N2AB | 7870 | 23833;23834;23835 | chr2:178718547;178718546;178718545 | chr2:179583274;179583273;179583272 |
N2A | 6943 | 21052;21053;21054 | chr2:178718547;178718546;178718545 | chr2:179583274;179583273;179583272 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1417467243 | 0.134 | 0.942 | N | 0.636 | 0.31 | 0.339074221408 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
P/R | rs1417467243 | 0.134 | 0.942 | N | 0.636 | 0.31 | 0.339074221408 | gnomAD-4.0.0 | 4.77506E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57716E-06 | 0 | 0 |
P/S | None | None | 0.025 | N | 0.293 | 0.093 | 0.0762999501168 | gnomAD-4.0.0 | 1.59169E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77408E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0814 | likely_benign | 0.0781 | benign | -1.212 | Destabilizing | 0.489 | N | 0.431 | neutral | N | 0.452311526 | None | None | I |
P/C | 0.5332 | ambiguous | 0.5238 | ambiguous | -1.03 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | I |
P/D | 0.4716 | ambiguous | 0.3959 | ambiguous | -0.554 | Destabilizing | 0.86 | D | 0.457 | neutral | None | None | None | None | I |
P/E | 0.3516 | ambiguous | 0.2954 | benign | -0.543 | Destabilizing | 0.86 | D | 0.457 | neutral | None | None | None | None | I |
P/F | 0.5217 | ambiguous | 0.4824 | ambiguous | -0.794 | Destabilizing | 0.978 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/G | 0.2801 | likely_benign | 0.2601 | benign | -1.534 | Destabilizing | 0.754 | D | 0.465 | neutral | None | None | None | None | I |
P/H | 0.1869 | likely_benign | 0.1784 | benign | -0.925 | Destabilizing | 0.992 | D | 0.624 | neutral | N | 0.461719275 | None | None | I |
P/I | 0.409 | ambiguous | 0.3785 | ambiguous | -0.439 | Destabilizing | 0.978 | D | 0.695 | prob.neutral | None | None | None | None | I |
P/K | 0.2905 | likely_benign | 0.2528 | benign | -0.989 | Destabilizing | 0.754 | D | 0.456 | neutral | None | None | None | None | I |
P/L | 0.1676 | likely_benign | 0.1523 | benign | -0.439 | Destabilizing | 0.942 | D | 0.603 | neutral | N | 0.504309065 | None | None | I |
P/M | 0.3756 | ambiguous | 0.3541 | ambiguous | -0.475 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | I |
P/N | 0.2771 | likely_benign | 0.2512 | benign | -0.83 | Destabilizing | 0.915 | D | 0.549 | neutral | None | None | None | None | I |
P/Q | 0.1707 | likely_benign | 0.1559 | benign | -0.938 | Destabilizing | 0.956 | D | 0.531 | neutral | None | None | None | None | I |
P/R | 0.1804 | likely_benign | 0.1578 | benign | -0.536 | Destabilizing | 0.942 | D | 0.636 | neutral | N | 0.497863095 | None | None | I |
P/S | 0.0985 | likely_benign | 0.0937 | benign | -1.455 | Destabilizing | 0.025 | N | 0.293 | neutral | N | 0.415705859 | None | None | I |
P/T | 0.1081 | likely_benign | 0.1046 | benign | -1.318 | Destabilizing | 0.698 | D | 0.421 | neutral | N | 0.47379137 | None | None | I |
P/V | 0.2739 | likely_benign | 0.2531 | benign | -0.66 | Destabilizing | 0.956 | D | 0.541 | neutral | None | None | None | None | I |
P/W | 0.6962 | likely_pathogenic | 0.6446 | pathogenic | -0.934 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | I |
P/Y | 0.4665 | ambiguous | 0.44 | ambiguous | -0.645 | Destabilizing | 0.993 | D | 0.693 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.