Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8193 | 24802;24803;24804 | chr2:178718529;178718528;178718527 | chr2:179583256;179583255;179583254 |
N2AB | 7876 | 23851;23852;23853 | chr2:178718529;178718528;178718527 | chr2:179583256;179583255;179583254 |
N2A | 6949 | 21070;21071;21072 | chr2:178718529;178718528;178718527 | chr2:179583256;179583255;179583254 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs774247592 | -1.495 | 0.454 | N | 0.433 | 0.144 | 0.369867359543 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
T/A | rs774247592 | -1.495 | 0.454 | N | 0.433 | 0.144 | 0.369867359543 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 0 | 0 | 0 |
T/A | rs774247592 | -1.495 | 0.454 | N | 0.433 | 0.144 | 0.369867359543 | gnomAD-4.0.0 | 1.02488E-05 | None | None | None | None | N | None | 0 | 1.69451E-05 | None | 0 | 0 | None | 9.41413E-05 | 0 | 2.39316E-06 | 0 | 0 |
T/I | None | None | 0.012 | D | 0.315 | 0.215 | 0.438170831126 | gnomAD-4.0.0 | 1.59148E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85855E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1178 | likely_benign | 0.1054 | benign | -1.235 | Destabilizing | 0.454 | N | 0.433 | neutral | N | 0.487240174 | None | None | N |
T/C | 0.6621 | likely_pathogenic | 0.6294 | pathogenic | -0.804 | Destabilizing | 0.998 | D | 0.506 | neutral | None | None | None | None | N |
T/D | 0.7025 | likely_pathogenic | 0.6549 | pathogenic | -0.916 | Destabilizing | 0.842 | D | 0.459 | neutral | None | None | None | None | N |
T/E | 0.5474 | ambiguous | 0.4813 | ambiguous | -0.781 | Destabilizing | 0.728 | D | 0.477 | neutral | None | None | None | None | N |
T/F | 0.4499 | ambiguous | 0.4076 | ambiguous | -0.956 | Destabilizing | 0.949 | D | 0.566 | neutral | None | None | None | None | N |
T/G | 0.4374 | ambiguous | 0.3861 | ambiguous | -1.601 | Destabilizing | 0.728 | D | 0.517 | neutral | None | None | None | None | N |
T/H | 0.5054 | ambiguous | 0.4668 | ambiguous | -1.65 | Destabilizing | 0.993 | D | 0.562 | neutral | None | None | None | None | N |
T/I | 0.2554 | likely_benign | 0.2555 | benign | -0.298 | Destabilizing | 0.012 | N | 0.315 | neutral | D | 0.527000363 | None | None | N |
T/K | 0.4778 | ambiguous | 0.4084 | ambiguous | -0.598 | Destabilizing | 0.669 | D | 0.477 | neutral | N | 0.491172849 | None | None | N |
T/L | 0.1958 | likely_benign | 0.1745 | benign | -0.298 | Destabilizing | 0.525 | D | 0.459 | neutral | None | None | None | None | N |
T/M | 0.1475 | likely_benign | 0.1343 | benign | -0.214 | Destabilizing | 0.949 | D | 0.525 | neutral | None | None | None | None | N |
T/N | 0.2528 | likely_benign | 0.2403 | benign | -0.976 | Destabilizing | 0.842 | D | 0.469 | neutral | None | None | None | None | N |
T/P | 0.5346 | ambiguous | 0.4745 | ambiguous | -0.579 | Destabilizing | 0.966 | D | 0.539 | neutral | D | 0.534003694 | None | None | N |
T/Q | 0.4127 | ambiguous | 0.3564 | ambiguous | -0.932 | Destabilizing | 0.325 | N | 0.304 | neutral | None | None | None | None | N |
T/R | 0.3749 | ambiguous | 0.3162 | benign | -0.597 | Destabilizing | 0.934 | D | 0.525 | neutral | N | 0.482150721 | None | None | N |
T/S | 0.1615 | likely_benign | 0.1484 | benign | -1.301 | Destabilizing | 0.022 | N | 0.169 | neutral | N | 0.485383027 | None | None | N |
T/V | 0.1842 | likely_benign | 0.1805 | benign | -0.579 | Destabilizing | 0.525 | D | 0.481 | neutral | None | None | None | None | N |
T/W | 0.846 | likely_pathogenic | 0.8197 | pathogenic | -0.952 | Destabilizing | 0.998 | D | 0.592 | neutral | None | None | None | None | N |
T/Y | 0.5535 | ambiguous | 0.5112 | ambiguous | -0.65 | Destabilizing | 0.991 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.