Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8194 | 24805;24806;24807 | chr2:178718526;178718525;178718524 | chr2:179583253;179583252;179583251 |
N2AB | 7877 | 23854;23855;23856 | chr2:178718526;178718525;178718524 | chr2:179583253;179583252;179583251 |
N2A | 6950 | 21073;21074;21075 | chr2:178718526;178718525;178718524 | chr2:179583253;179583252;179583251 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs763264570 | -1.74 | 0.295 | N | 0.647 | 0.307 | 0.31291088546 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Y/H | rs763264570 | -1.74 | 0.295 | N | 0.647 | 0.307 | 0.31291088546 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85848E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8786 | likely_pathogenic | 0.8866 | pathogenic | -2.751 | Highly Destabilizing | 0.016 | N | 0.585 | neutral | None | None | None | None | N |
Y/C | 0.2993 | likely_benign | 0.2958 | benign | -1.734 | Destabilizing | None | N | 0.495 | neutral | N | 0.504619959 | None | None | N |
Y/D | 0.9747 | likely_pathogenic | 0.9806 | pathogenic | -2.61 | Highly Destabilizing | 0.171 | N | 0.788 | deleterious | N | 0.504619959 | None | None | N |
Y/E | 0.9886 | likely_pathogenic | 0.991 | pathogenic | -2.418 | Highly Destabilizing | 0.072 | N | 0.74 | deleterious | None | None | None | None | N |
Y/F | 0.0573 | likely_benign | 0.07 | benign | -0.992 | Destabilizing | None | N | 0.203 | neutral | N | 0.457001561 | None | None | N |
Y/G | 0.9051 | likely_pathogenic | 0.9173 | pathogenic | -3.158 | Highly Destabilizing | 0.072 | N | 0.728 | prob.delet. | None | None | None | None | N |
Y/H | 0.6782 | likely_pathogenic | 0.7152 | pathogenic | -1.779 | Destabilizing | 0.295 | N | 0.647 | neutral | N | 0.515976264 | None | None | N |
Y/I | 0.6813 | likely_pathogenic | 0.6938 | pathogenic | -1.428 | Destabilizing | 0.038 | N | 0.623 | neutral | None | None | None | None | N |
Y/K | 0.9803 | likely_pathogenic | 0.9828 | pathogenic | -1.732 | Destabilizing | 0.072 | N | 0.737 | prob.delet. | None | None | None | None | N |
Y/L | 0.7836 | likely_pathogenic | 0.7841 | pathogenic | -1.428 | Destabilizing | 0.016 | N | 0.507 | neutral | None | None | None | None | N |
Y/M | 0.8386 | likely_pathogenic | 0.8518 | pathogenic | -1.331 | Destabilizing | 0.356 | N | 0.737 | prob.delet. | None | None | None | None | N |
Y/N | 0.8831 | likely_pathogenic | 0.9074 | pathogenic | -2.395 | Highly Destabilizing | 0.171 | N | 0.777 | deleterious | N | 0.515976264 | None | None | N |
Y/P | 0.9905 | likely_pathogenic | 0.9914 | pathogenic | -1.879 | Destabilizing | 0.628 | D | 0.805 | deleterious | None | None | None | None | N |
Y/Q | 0.9661 | likely_pathogenic | 0.972 | pathogenic | -2.183 | Highly Destabilizing | 0.356 | N | 0.74 | deleterious | None | None | None | None | N |
Y/R | 0.9464 | likely_pathogenic | 0.9486 | pathogenic | -1.496 | Destabilizing | 0.356 | N | 0.775 | deleterious | None | None | None | None | N |
Y/S | 0.8052 | likely_pathogenic | 0.8295 | pathogenic | -2.876 | Highly Destabilizing | 0.002 | N | 0.478 | neutral | D | 0.52711222 | None | None | N |
Y/T | 0.9018 | likely_pathogenic | 0.9143 | pathogenic | -2.563 | Highly Destabilizing | 0.072 | N | 0.677 | prob.neutral | None | None | None | None | N |
Y/V | 0.5636 | ambiguous | 0.5571 | ambiguous | -1.879 | Destabilizing | 0.001 | N | 0.397 | neutral | None | None | None | None | N |
Y/W | 0.448 | ambiguous | 0.4723 | ambiguous | -0.328 | Destabilizing | 0.356 | N | 0.638 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.