Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8197 | 24814;24815;24816 | chr2:178718517;178718516;178718515 | chr2:179583244;179583243;179583242 |
N2AB | 7880 | 23863;23864;23865 | chr2:178718517;178718516;178718515 | chr2:179583244;179583243;179583242 |
N2A | 6953 | 21082;21083;21084 | chr2:178718517;178718516;178718515 | chr2:179583244;179583243;179583242 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs748587371 | -0.163 | 0.966 | N | 0.446 | 0.295 | 0.498001352042 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
T/I | rs748587371 | -0.163 | 0.966 | N | 0.446 | 0.295 | 0.498001352042 | gnomAD-4.0.0 | 8.21081E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51991E-05 | None | 0 | 0 | 8.99486E-06 | 0 | 1.65689E-05 |
T/K | rs748587371 | -0.613 | 0.801 | N | 0.457 | 0.324 | 0.47558534428 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1531 | likely_benign | 0.1416 | benign | -0.273 | Destabilizing | 0.051 | N | 0.238 | neutral | N | 0.484465015 | None | None | N |
T/C | 0.6758 | likely_pathogenic | 0.6247 | pathogenic | -0.265 | Destabilizing | 0.998 | D | 0.455 | neutral | None | None | None | None | N |
T/D | 0.4584 | ambiguous | 0.4985 | ambiguous | 0.047 | Stabilizing | 0.842 | D | 0.435 | neutral | None | None | None | None | N |
T/E | 0.4743 | ambiguous | 0.461 | ambiguous | -0.024 | Destabilizing | 0.842 | D | 0.462 | neutral | None | None | None | None | N |
T/F | 0.3258 | likely_benign | 0.29 | benign | -0.734 | Destabilizing | 0.974 | D | 0.57 | neutral | None | None | None | None | N |
T/G | 0.4317 | ambiguous | 0.4021 | ambiguous | -0.408 | Destabilizing | 0.728 | D | 0.545 | neutral | None | None | None | None | N |
T/H | 0.3513 | ambiguous | 0.3535 | ambiguous | -0.635 | Destabilizing | 0.081 | N | 0.517 | neutral | None | None | None | None | N |
T/I | 0.3568 | ambiguous | 0.2892 | benign | -0.038 | Destabilizing | 0.966 | D | 0.446 | neutral | N | 0.513935066 | None | None | N |
T/K | 0.3793 | ambiguous | 0.3304 | benign | -0.421 | Destabilizing | 0.801 | D | 0.457 | neutral | N | 0.493174748 | None | None | N |
T/L | 0.1947 | likely_benign | 0.1639 | benign | -0.038 | Destabilizing | 0.842 | D | 0.399 | neutral | None | None | None | None | N |
T/M | 0.1329 | likely_benign | 0.1226 | benign | -0.017 | Destabilizing | 0.998 | D | 0.429 | neutral | None | None | None | None | N |
T/N | 0.153 | likely_benign | 0.1551 | benign | -0.161 | Destabilizing | 0.842 | D | 0.397 | neutral | None | None | None | None | N |
T/P | 0.4444 | ambiguous | 0.3835 | ambiguous | -0.088 | Destabilizing | 0.012 | N | 0.321 | neutral | N | 0.507319438 | None | None | N |
T/Q | 0.3494 | ambiguous | 0.3348 | benign | -0.367 | Destabilizing | 0.974 | D | 0.441 | neutral | None | None | None | None | N |
T/R | 0.3167 | likely_benign | 0.2882 | benign | -0.126 | Destabilizing | 0.934 | D | 0.443 | neutral | N | 0.485478974 | None | None | N |
T/S | 0.0984 | likely_benign | 0.1059 | benign | -0.341 | Destabilizing | 0.051 | N | 0.273 | neutral | N | 0.473587166 | None | None | N |
T/V | 0.2953 | likely_benign | 0.2427 | benign | -0.088 | Destabilizing | 0.842 | D | 0.35 | neutral | None | None | None | None | N |
T/W | 0.692 | likely_pathogenic | 0.6838 | pathogenic | -0.78 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | N |
T/Y | 0.3606 | ambiguous | 0.3332 | benign | -0.491 | Destabilizing | 0.949 | D | 0.574 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.