Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8199 | 24820;24821;24822 | chr2:178718511;178718510;178718509 | chr2:179583238;179583237;179583236 |
N2AB | 7882 | 23869;23870;23871 | chr2:178718511;178718510;178718509 | chr2:179583238;179583237;179583236 |
N2A | 6955 | 21088;21089;21090 | chr2:178718511;178718510;178718509 | chr2:179583238;179583237;179583236 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1438804317 | None | 0.27 | D | 0.393 | 0.202 | 0.274366138417 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 4.79386E-04 |
P/S | rs1438804317 | None | 0.27 | D | 0.393 | 0.202 | 0.274366138417 | gnomAD-4.0.0 | 4.33807E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08578E-06 | 0 | 1.60159E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0772 | likely_benign | 0.0877 | benign | -0.433 | Destabilizing | 0.27 | N | 0.407 | neutral | D | 0.528728373 | None | None | N |
P/C | 0.5255 | ambiguous | 0.5307 | ambiguous | -0.673 | Destabilizing | 0.995 | D | 0.489 | neutral | None | None | None | None | N |
P/D | 0.3054 | likely_benign | 0.4031 | ambiguous | -0.419 | Destabilizing | 0.543 | D | 0.383 | neutral | None | None | None | None | N |
P/E | 0.1999 | likely_benign | 0.2638 | benign | -0.539 | Destabilizing | 0.031 | N | 0.281 | neutral | None | None | None | None | N |
P/F | 0.4168 | ambiguous | 0.4892 | ambiguous | -0.716 | Destabilizing | 0.944 | D | 0.492 | neutral | None | None | None | None | N |
P/G | 0.3011 | likely_benign | 0.3464 | ambiguous | -0.54 | Destabilizing | 0.704 | D | 0.458 | neutral | None | None | None | None | N |
P/H | 0.179 | likely_benign | 0.219 | benign | -0.147 | Destabilizing | 0.944 | D | 0.486 | neutral | None | None | None | None | N |
P/I | 0.2698 | likely_benign | 0.3277 | benign | -0.303 | Destabilizing | 0.031 | N | 0.399 | neutral | None | None | None | None | N |
P/K | 0.2253 | likely_benign | 0.2761 | benign | -0.491 | Destabilizing | 0.013 | N | 0.215 | neutral | None | None | None | None | N |
P/L | 0.1186 | likely_benign | 0.14 | benign | -0.303 | Destabilizing | 0.27 | N | 0.477 | neutral | N | 0.510836045 | None | None | N |
P/M | 0.2752 | likely_benign | 0.3189 | benign | -0.444 | Destabilizing | 0.944 | D | 0.484 | neutral | None | None | None | None | N |
P/N | 0.2601 | likely_benign | 0.3254 | benign | -0.233 | Destabilizing | 0.031 | N | 0.352 | neutral | None | None | None | None | N |
P/Q | 0.1328 | likely_benign | 0.1596 | benign | -0.477 | Destabilizing | 0.642 | D | 0.408 | neutral | N | 0.48777947 | None | None | N |
P/R | 0.1567 | likely_benign | 0.1884 | benign | 0.021 | Stabilizing | 0.473 | N | 0.473 | neutral | N | 0.510836045 | None | None | N |
P/S | 0.113 | likely_benign | 0.1347 | benign | -0.54 | Destabilizing | 0.27 | N | 0.393 | neutral | D | 0.527824296 | None | None | N |
P/T | 0.1003 | likely_benign | 0.122 | benign | -0.563 | Destabilizing | 0.023 | N | 0.269 | neutral | N | 0.501003054 | None | None | N |
P/V | 0.1833 | likely_benign | 0.2134 | benign | -0.313 | Destabilizing | 0.329 | N | 0.455 | neutral | None | None | None | None | N |
P/W | 0.6308 | likely_pathogenic | 0.6872 | pathogenic | -0.794 | Destabilizing | 0.995 | D | 0.524 | neutral | None | None | None | None | N |
P/Y | 0.4066 | ambiguous | 0.4655 | ambiguous | -0.505 | Destabilizing | 0.981 | D | 0.493 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.