Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8206 | 24841;24842;24843 | chr2:178718490;178718489;178718488 | chr2:179583217;179583216;179583215 |
N2AB | 7889 | 23890;23891;23892 | chr2:178718490;178718489;178718488 | chr2:179583217;179583216;179583215 |
N2A | 6962 | 21109;21110;21111 | chr2:178718490;178718489;178718488 | chr2:179583217;179583216;179583215 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2154299557 | None | 0.993 | N | 0.659 | 0.383 | 0.27479166964 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs2154299557 | None | 0.993 | N | 0.659 | 0.383 | 0.27479166964 | gnomAD-4.0.0 | 1.31382E-05 | None | None | None | None | N | None | 0 | 1.30804E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8905 | likely_pathogenic | 0.8486 | pathogenic | -0.992 | Destabilizing | 0.983 | D | 0.555 | neutral | None | None | None | None | N |
K/C | 0.9363 | likely_pathogenic | 0.9182 | pathogenic | -0.885 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
K/D | 0.9777 | likely_pathogenic | 0.9619 | pathogenic | -0.475 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | N |
K/E | 0.7183 | likely_pathogenic | 0.6268 | pathogenic | -0.283 | Destabilizing | 0.977 | D | 0.499 | neutral | D | 0.535868858 | None | None | N |
K/F | 0.9702 | likely_pathogenic | 0.9605 | pathogenic | -0.534 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
K/G | 0.9323 | likely_pathogenic | 0.9045 | pathogenic | -1.423 | Destabilizing | 0.998 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/H | 0.7007 | likely_pathogenic | 0.656 | pathogenic | -1.718 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
K/I | 0.8302 | likely_pathogenic | 0.7742 | pathogenic | 0.172 | Stabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
K/L | 0.8294 | likely_pathogenic | 0.7662 | pathogenic | 0.172 | Stabilizing | 0.995 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/M | 0.6503 | likely_pathogenic | 0.5894 | pathogenic | 0.012 | Stabilizing | 1.0 | D | 0.74 | deleterious | D | 0.535615369 | None | None | N |
K/N | 0.9259 | likely_pathogenic | 0.8913 | pathogenic | -0.854 | Destabilizing | 0.993 | D | 0.659 | neutral | N | 0.517511114 | None | None | N |
K/P | 0.9923 | likely_pathogenic | 0.9889 | pathogenic | -0.189 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/Q | 0.4076 | ambiguous | 0.3538 | ambiguous | -0.763 | Destabilizing | 0.993 | D | 0.641 | neutral | D | 0.53510839 | None | None | N |
K/R | 0.1177 | likely_benign | 0.1054 | benign | -0.705 | Destabilizing | 0.235 | N | 0.325 | neutral | N | 0.458293143 | None | None | N |
K/S | 0.9173 | likely_pathogenic | 0.8852 | pathogenic | -1.549 | Destabilizing | 0.983 | D | 0.555 | neutral | None | None | None | None | N |
K/T | 0.7838 | likely_pathogenic | 0.729 | pathogenic | -1.117 | Destabilizing | 0.997 | D | 0.695 | prob.neutral | D | 0.535361879 | None | None | N |
K/V | 0.8112 | likely_pathogenic | 0.7569 | pathogenic | -0.189 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
K/W | 0.9577 | likely_pathogenic | 0.9419 | pathogenic | -0.439 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
K/Y | 0.9284 | likely_pathogenic | 0.9005 | pathogenic | -0.114 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.