Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8210 | 24853;24854;24855 | chr2:178718478;178718477;178718476 | chr2:179583205;179583204;179583203 |
N2AB | 7893 | 23902;23903;23904 | chr2:178718478;178718477;178718476 | chr2:179583205;179583204;179583203 |
N2A | 6966 | 21121;21122;21123 | chr2:178718478;178718477;178718476 | chr2:179583205;179583204;179583203 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.014 | N | 0.332 | 0.167 | 0.39619538035 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8585E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0649 | likely_benign | 0.0684 | benign | -0.641 | Destabilizing | None | N | 0.149 | neutral | None | None | None | None | I |
L/C | 0.2228 | likely_benign | 0.2126 | benign | -0.723 | Destabilizing | 0.245 | N | 0.305 | neutral | None | None | None | None | I |
L/D | 0.1953 | likely_benign | 0.2003 | benign | 0.117 | Stabilizing | None | N | 0.186 | neutral | None | None | None | None | I |
L/E | 0.1053 | likely_benign | 0.1101 | benign | 0.057 | Stabilizing | None | N | 0.186 | neutral | None | None | None | None | I |
L/F | 0.0809 | likely_benign | 0.0825 | benign | -0.473 | Destabilizing | 0.065 | N | 0.281 | neutral | N | 0.493543596 | None | None | I |
L/G | 0.164 | likely_benign | 0.1759 | benign | -0.829 | Destabilizing | 0.002 | N | 0.338 | neutral | None | None | None | None | I |
L/H | 0.0831 | likely_benign | 0.0848 | benign | -0.055 | Destabilizing | 0.196 | N | 0.406 | neutral | N | 0.492783128 | None | None | I |
L/I | 0.0634 | likely_benign | 0.062 | benign | -0.258 | Destabilizing | 0.014 | N | 0.271 | neutral | N | 0.501485843 | None | None | I |
L/K | 0.0948 | likely_benign | 0.0991 | benign | -0.371 | Destabilizing | 0.004 | N | 0.315 | neutral | None | None | None | None | I |
L/M | 0.0801 | likely_benign | 0.0806 | benign | -0.436 | Destabilizing | 0.245 | N | 0.314 | neutral | None | None | None | None | I |
L/N | 0.107 | likely_benign | 0.1157 | benign | -0.279 | Destabilizing | None | N | 0.205 | neutral | None | None | None | None | I |
L/P | 0.0526 | likely_benign | 0.0495 | benign | -0.353 | Destabilizing | None | N | 0.186 | neutral | N | 0.440781314 | None | None | I |
L/Q | 0.0672 | likely_benign | 0.0703 | benign | -0.424 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | I |
L/R | 0.0759 | likely_benign | 0.0772 | benign | 0.105 | Stabilizing | 0.014 | N | 0.332 | neutral | N | 0.483375379 | None | None | I |
L/S | 0.078 | likely_benign | 0.0813 | benign | -0.788 | Destabilizing | None | N | 0.149 | neutral | None | None | None | None | I |
L/T | 0.068 | likely_benign | 0.0718 | benign | -0.735 | Destabilizing | 0.004 | N | 0.263 | neutral | None | None | None | None | I |
L/V | 0.0621 | likely_benign | 0.0622 | benign | -0.353 | Destabilizing | 0.003 | N | 0.183 | neutral | N | 0.520724965 | None | None | I |
L/W | 0.136 | likely_benign | 0.1266 | benign | -0.509 | Destabilizing | 0.788 | D | 0.318 | neutral | None | None | None | None | I |
L/Y | 0.1397 | likely_benign | 0.1422 | benign | -0.266 | Destabilizing | 0.085 | N | 0.369 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.