Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8219 | 24880;24881;24882 | chr2:178718451;178718450;178718449 | chr2:179583178;179583177;179583176 |
N2AB | 7902 | 23929;23930;23931 | chr2:178718451;178718450;178718449 | chr2:179583178;179583177;179583176 |
N2A | 6975 | 21148;21149;21150 | chr2:178718451;178718450;178718449 | chr2:179583178;179583177;179583176 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.003 | D | 0.251 | 0.384 | 0.693211236521 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | I | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs766216038 | -1.13 | None | N | 0.156 | 0.122 | 0.503744809241 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs766216038 | -1.13 | None | N | 0.156 | 0.122 | 0.503744809241 | gnomAD-4.0.0 | 3.18271E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85848E-06 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5526 | ambiguous | 0.6036 | pathogenic | -2.027 | Highly Destabilizing | 0.025 | N | 0.287 | neutral | None | None | None | None | I |
I/C | 0.7941 | likely_pathogenic | 0.8002 | pathogenic | -1.292 | Destabilizing | 0.859 | D | 0.521 | neutral | None | None | None | None | I |
I/D | 0.8871 | likely_pathogenic | 0.9149 | pathogenic | -1.667 | Destabilizing | 0.22 | N | 0.599 | neutral | None | None | None | None | I |
I/E | 0.7186 | likely_pathogenic | 0.7637 | pathogenic | -1.609 | Destabilizing | 0.22 | N | 0.548 | neutral | None | None | None | None | I |
I/F | 0.1716 | likely_benign | 0.1773 | benign | -1.449 | Destabilizing | 0.001 | N | 0.226 | neutral | N | 0.50677646 | None | None | I |
I/G | 0.8386 | likely_pathogenic | 0.8747 | pathogenic | -2.427 | Highly Destabilizing | 0.22 | N | 0.492 | neutral | None | None | None | None | I |
I/H | 0.6604 | likely_pathogenic | 0.6824 | pathogenic | -1.75 | Destabilizing | 0.859 | D | 0.565 | neutral | None | None | None | None | I |
I/K | 0.51 | ambiguous | 0.5481 | ambiguous | -1.396 | Destabilizing | 0.22 | N | 0.547 | neutral | None | None | None | None | I |
I/L | 0.1421 | likely_benign | 0.1497 | benign | -0.962 | Destabilizing | None | N | 0.105 | neutral | D | 0.530115239 | None | None | I |
I/M | 0.1142 | likely_benign | 0.1235 | benign | -0.723 | Destabilizing | 0.019 | N | 0.241 | neutral | D | 0.533944978 | None | None | I |
I/N | 0.4661 | ambiguous | 0.539 | ambiguous | -1.292 | Destabilizing | 0.175 | N | 0.637 | neutral | D | 0.533403092 | None | None | I |
I/P | 0.9319 | likely_pathogenic | 0.9444 | pathogenic | -1.288 | Destabilizing | 0.001 | N | 0.373 | neutral | None | None | None | None | I |
I/Q | 0.581 | likely_pathogenic | 0.6117 | pathogenic | -1.408 | Destabilizing | 0.667 | D | 0.625 | neutral | None | None | None | None | I |
I/R | 0.418 | ambiguous | 0.4533 | ambiguous | -0.87 | Destabilizing | 0.497 | N | 0.63 | neutral | None | None | None | None | I |
I/S | 0.5089 | ambiguous | 0.5941 | pathogenic | -1.958 | Destabilizing | 0.008 | N | 0.377 | neutral | N | 0.521286318 | None | None | I |
I/T | 0.4153 | ambiguous | 0.4668 | ambiguous | -1.771 | Destabilizing | 0.003 | N | 0.251 | neutral | D | 0.526904363 | None | None | I |
I/V | 0.0851 | likely_benign | 0.0831 | benign | -1.288 | Destabilizing | None | N | 0.156 | neutral | N | 0.500866981 | None | None | I |
I/W | 0.7951 | likely_pathogenic | 0.7906 | pathogenic | -1.612 | Destabilizing | 0.958 | D | 0.579 | neutral | None | None | None | None | I |
I/Y | 0.5197 | ambiguous | 0.5413 | ambiguous | -1.366 | Destabilizing | 0.124 | N | 0.582 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.